RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KRT23Q9C075 422 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 CENPHQ9H3R5 247 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
USP42-201ENST00000306177 CAVIN2O95810 425 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 GSTO1P78417 241 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 MCMDC2Q4G0Z9 681 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 AMPD3Q01432 767 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 CALML4Q96GE6 196 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 GBP3Q9H0R5 595 aa18.4■□□□□ 0.54
USP42-201ENST00000306177 KLF18A0A0U1RQI7 1052 aa18.39■□□□□ 0.54
USP42-201ENST00000306177 HSPA2P54652 639 aa18.39■□□□□ 0.54
USP42-201ENST00000306177 GSDMDP57764 484 aa18.39■□□□□ 0.54
USP42-201ENST00000306177 KANK3Q6NY19 840 aa18.39■□□□□ 0.54
USP42-201ENST00000306177 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.54
USP42-201ENST00000306177 PPP4R3AQ6IN85 833 aa18.39■□□□□ 0.53
USP42-201ENST00000306177 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
USP42-201ENST00000306177 CALRP27797 417 aaKnown RBP18.39■□□□□ 0.53
USP42-201ENST00000306177 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
USP42-201ENST00000306177 WTAPQ15007 396 aa18.39■□□□□ 0.53
USP42-201ENST00000306177 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
USP42-201ENST00000306177 TOM1O60784 492 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 FAM193AP78312 1265 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 NUP88Q99567 741 aaPredicted RBP18.38■□□□□ 0.53
USP42-201ENST00000306177 TTC41PQ6P2S7 1318 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 BIN1O00499 593 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 ST5P78524 1137 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 YEATS4O95619 227 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 DDB1Q16531 1140 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 CEP85Q6P2H3 762 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 PDCL2Q8N4E4 241 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 DCTPP1Q9H773 170 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
USP42-201ENST00000306177 ZNF165P49910 485 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 CCDC102AQ96A19 550 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 DCAF5Q96JK2 942 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 CNNM2Q9H8M5 875 aa18.38■□□□□ 0.53
USP42-201ENST00000306177 CASQ1P31415 396 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 C16orf71Q8IYS4 520 aaPredicted RBP18.37■□□□□ 0.53
USP42-201ENST00000306177 TMTC2Q8N394 836 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
USP42-201ENST00000306177 CETN2P41208 172 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 UVSSAQ2YD98 709 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 PA2G4Q9UQ80 394 aaKnown RBP18.37■□□□□ 0.53
USP42-201ENST00000306177 KIAA0754O94854 1291 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 UBA7P41226 1012 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 TMCO3Q6UWJ1 677 aa18.37■□□□□ 0.53
USP42-201ENST00000306177 ZBTB43O43298 467 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 SSR1P43307 286 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 URI1O94763 535 aaPredicted RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 CYP7A1P22680 504 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 ZRSR2Q15696 482 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 SNX21Q969T3 373 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 VAT1LQ9HCJ6 419 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 UBAP1LF5GYI3 381 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 PPFIA3O75145 1194 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 ADCY5O95622 1261 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 RBM25P49756 843 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 ESR2Q92731 530 aa18.36■□□□□ 0.53
USP42-201ENST00000306177 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 SOS1Q07889 1333 aaPredicted RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 ZGPATQ8N5A5 531 aaKnown RBP18.36■□□□□ 0.53
USP42-201ENST00000306177 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
USP42-201ENST00000306177 USO1O60763 962 aaKnown RBP18.35■□□□□ 0.53
USP42-201ENST00000306177 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 MTIF2P46199 727 aaKnown RBP18.35■□□□□ 0.53
USP42-201ENST00000306177 TAX1BP1Q86VP1 789 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 IL13P35225 146 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 CPLX3Q8WVH0 158 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 PANK2Q9BZ23 570 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
USP42-201ENST00000306177 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
USP42-201ENST00000306177 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 C8orf34Q49A92 452 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 PAG1Q9NWQ8 432 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 IDEP14735 1019 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 CRACR2AQ9BSW2 395 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 SBNO1A3KN83 1393 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 BMP15O95972 392 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
USP42-201ENST00000306177 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
USP42-201ENST00000306177 SLC9C2Q5TAH2 1124 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 FEZ1Q99689 392 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 STX8Q9UNK0 236 aa18.34■□□□□ 0.53
USP42-201ENST00000306177 TNNT1P13805 278 aa18.33■□□□□ 0.53
USP42-201ENST00000306177 FAM114A1Q8IWE2 563 aa18.33■□□□□ 0.53
USP42-201ENST00000306177 TCEANC2Q96MN5 208 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms