RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
KARS-201ENST00000302445 IRX5P78411 483 aaPredicted RBP16.26■□□□□ 0.19
KARS-201ENST00000302445 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
KARS-201ENST00000302445 ERBB3P21860 1342 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 ATP8B1O43520 1251 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 KCNJ4P48050 445 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 ELF2Q15723 593 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 BLOC1S2Q6QNY1 142 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
KARS-201ENST00000302445 ZNF592Q92610 1267 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 HDAC5Q9UQL6 1122 aa16.26■□□□□ 0.19
KARS-201ENST00000302445 MED1Q15648 1581 aaPredicted RBP16.25■□□□□ 0.19
KARS-201ENST00000302445 HOXB7P09629 217 aa16.25■□□□□ 0.19
KARS-201ENST00000302445 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
KARS-201ENST00000302445 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
KARS-201ENST00000302445 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
KARS-201ENST00000302445 USP54Q70EL1 1684 aa16.25■□□□□ 0.19
KARS-201ENST00000302445 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
KARS-201ENST00000302445 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
KARS-201ENST00000302445 CCP110O43303 1012 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 RESTQ13127 1097 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 CCDC150Q8NCX0 1101 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 NOL10Q9BSC4 688 aaKnown RBP16.24■□□□□ 0.19
KARS-201ENST00000302445 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
KARS-201ENST00000302445 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 ADCY9O60503 1353 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 SLC27A2O14975 620 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 RAPGEF3O95398 923 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
KARS-201ENST00000302445 NAT10Q9H0A0 1025 aaKnown RBP16.24■□□□□ 0.19
KARS-201ENST00000302445 KIF13AQ9H1H9 1805 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
KARS-201ENST00000302445 USP27XA6NNY8 438 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 GNAT3A8MTJ3 354 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 NRDCO43847 1150 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 KRT32Q14532 448 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 ARGLU1Q9NWB6 273 aaPredicted RBP16.23■□□□□ 0.19
KARS-201ENST00000302445 CHMP3Q9Y3E7 222 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 METP08581 1390 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 BECN2A8MW95 431 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 FOXO3O43524 673 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
KARS-201ENST00000302445 FILIP1Q7Z7B0 1213 aa16.23■□□□□ 0.19
KARS-201ENST00000302445 SRRTQ9BXP5 876 aaKnown RBP16.23■□□□□ 0.19
KARS-201ENST00000302445 MED23Q9ULK4 1368 aa16.22■□□□□ 0.19
KARS-201ENST00000302445 SNW1Q13573 536 aaKnown RBP16.22■□□□□ 0.19
KARS-201ENST00000302445 TEX35Q5T0J7 233 aa16.22■□□□□ 0.19
KARS-201ENST00000302445 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
KARS-201ENST00000302445 ZNF446Q9NWS9 450 aa16.22■□□□□ 0.19
KARS-201ENST00000302445 TPM1P09493 284 aa16.21■□□□□ 0.19
KARS-201ENST00000302445 TPM4P67936 248 aa16.21■□□□□ 0.19
KARS-201ENST00000302445 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
KARS-201ENST00000302445 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.19
KARS-201ENST00000302445 RFX7Q2KHR2 1363 aa16.21■□□□□ 0.19
KARS-201ENST00000302445 TOB2Q14106 344 aaPredicted RBP16.21■□□□□ 0.18
KARS-201ENST00000302445 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.18
KARS-201ENST00000302445 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.18
KARS-201ENST00000302445 GTF3C6Q969F1 213 aa16.21■□□□□ 0.18
KARS-201ENST00000302445 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.18
KARS-201ENST00000302445 RCOR1Q9UKL0 485 aa16.21■□□□□ 0.18
KARS-201ENST00000302445 FHOD1Q9Y613 1164 aa16.21■□□□□ 0.18
KARS-201ENST00000302445 SLIT1O75093 1534 aa16.2■□□□□ 0.18
KARS-201ENST00000302445 PHLPP2Q6ZVD8 1323 aa16.2■□□□□ 0.18
KARS-201ENST00000302445 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
KARS-201ENST00000302445 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
KARS-201ENST00000302445 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
KARS-201ENST00000302445 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
KARS-201ENST00000302445 FAM173BQ6P4H8 233 aa16.2■□□□□ 0.18
KARS-201ENST00000302445 C11orf57Q6ZUT1 292 aaPredicted RBP16.2■□□□□ 0.18
KARS-201ENST00000302445 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
KARS-201ENST00000302445 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.2■□□□□ 0.18
KARS-201ENST00000302445 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
KARS-201ENST00000302445 TXLNBQ8N3L3 684 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.19■□□□□ 0.18
KARS-201ENST00000302445 NWD1Q149M9 1564 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 DIP2BQ9P265 1576 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 MRC1P22897 1456 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 ACEP12821 1306 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
KARS-201ENST00000302445 PDE4CQ08493 712 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 DNAAF4Q8WXU2 420 aa16.19■□□□□ 0.18
KARS-201ENST00000302445 ABCC6O95255 1503 aa16.18■□□□□ 0.18
KARS-201ENST00000302445 PNMA6AP0CW24 399 aaPredicted RBP16.18■□□□□ 0.18
KARS-201ENST00000302445 CLCN6P51797 869 aa16.18■□□□□ 0.18
KARS-201ENST00000302445 FAM160A1Q05DH4 1040 aa16.18■□□□□ 0.18
KARS-201ENST00000302445 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
KARS-201ENST00000302445 USPL1Q5W0Q7 1092 aa16.18■□□□□ 0.18
KARS-201ENST00000302445 IFNLR1Q8IU57 520 aaPredicted RBP16.18■□□□□ 0.18
KARS-201ENST00000302445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.18■□□□□ 0.181e-9■□□□□ 10.5
KARS-201ENST00000302445 V9GYY5 206 aaPredicted RBP16.18■□□□□ 0.18
KARS-201ENST00000302445 KINO60870 393 aaKnown RBP16.18■□□□□ 0.18
KARS-201ENST00000302445 PPP1R13BQ96KQ4 1090 aa16.18■□□□□ 0.18
KARS-201ENST00000302445 USP16Q9Y5T5 823 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms