RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NHSQ6T4R5 1651 aa27.09■■□□□ 1.93
SMAD1-201ENST00000302085 CTSWP56202 376 aa27.09■■□□□ 1.93
SMAD1-201ENST00000302085 IFIT5Q13325 482 aaKnown RBP27.09■■□□□ 1.93
SMAD1-201ENST00000302085 FBXO3Q9UK99 471 aa27.09■■□□□ 1.93
SMAD1-201ENST00000302085 QTRT2Q9H974 415 aaKnown RBP27.08■■□□□ 1.93
SMAD1-201ENST00000302085 PDE8AO60658 829 aa27.08■■□□□ 1.92
SMAD1-201ENST00000302085 CWC27Q6UX04 472 aaKnown RBP27.08■■□□□ 1.92
SMAD1-201ENST00000302085 ANTXR1Q9H6X2 564 aa27.08■■□□□ 1.92
SMAD1-201ENST00000302085 GREM2Q9H772 168 aa27.08■■□□□ 1.92
SMAD1-201ENST00000302085 CNTNAP4Q9C0A0 1308 aa27.07■■□□□ 1.92
SMAD1-201ENST00000302085 TIMM10P62072 90 aa27.07■■□□□ 1.92
SMAD1-201ENST00000302085 SPRYD3Q8NCJ5 442 aa27.07■■□□□ 1.92
SMAD1-201ENST00000302085 SLKQ9H2G2 1235 aaPredicted RBP27.07■■□□□ 1.92
SMAD1-201ENST00000302085 DIAPH3Q9NSV4 1193 aa27.07■■□□□ 1.92
SMAD1-201ENST00000302085 EPB41L2O43491 1005 aaKnown RBP27.06■■□□□ 1.92
SMAD1-201ENST00000302085 PARP10Q53GL7 1025 aa27.06■■□□□ 1.92
SMAD1-201ENST00000302085 NEUROD6Q96NK8 337 aa27.06■■□□□ 1.92
SMAD1-201ENST00000302085 UTP14AQ9BVJ6 771 aaKnown RBP27.06■■□□□ 1.92
SMAD1-201ENST00000302085 CEP126Q9P2H0 1117 aa27.06■■□□□ 1.92
SMAD1-201ENST00000302085 ITGA6P23229 1130 aa27.05■■□□□ 1.92
SMAD1-201ENST00000302085 NBR1Q14596 966 aa27.05■■□□□ 1.92
SMAD1-201ENST00000302085 TAF7LQ5H9L4 462 aa27.04■■□□□ 1.92
SMAD1-201ENST00000302085 RC3H1Q5TC82 1133 aaKnown RBP27.04■■□□□ 1.92
SMAD1-201ENST00000302085 FAM177BA6PVY3 158 aa27.04■■□□□ 1.92
SMAD1-201ENST00000302085 AK7Q96M32 723 aa27.04■■□□□ 1.92
SMAD1-201ENST00000302085 NIP7Q9Y221 180 aaKnown RBP eCLIP27.04■■□□□ 1.92
SMAD1-201ENST00000302085 SH3TC1Q8TE82 1336 aa27.04■■□□□ 1.92
SMAD1-201ENST00000302085 RUFY2Q8WXA3 655 aa27.03■■□□□ 1.92
SMAD1-201ENST00000302085 LSG1Q9H089 658 aaKnown RBP27.03■■□□□ 1.92
SMAD1-201ENST00000302085 ANKRD18BA2A2Z9 1011 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 MCCP23508 829 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 EDC3Q96F86 508 aaKnown RBP27.02■■□□□ 1.92
SMAD1-201ENST00000302085 PALD1Q9ULE6 856 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 ZNF609O15014 1411 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 HCLS1P14317 486 aaPredicted RBP27.02■■□□□ 1.92
SMAD1-201ENST00000302085 CLEC4GQ6UXB4 293 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 SMIM5Q71RC9 77 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 HAUS7Q99871 368 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 CCNL1Q9UK58 526 aaPredicted RBP27.02■■□□□ 1.92
SMAD1-201ENST00000302085 RIPOR2Q9Y4F9 1068 aa27.02■■□□□ 1.92
SMAD1-201ENST00000302085 MYH3P11055 1940 aa27.01■■□□□ 1.92
SMAD1-201ENST00000302085 SBF2Q86WG5 1849 aa27.01■■□□□ 1.91
SMAD1-201ENST00000302085 A0A1B0GUL7 405 aa27.01■■□□□ 1.91
SMAD1-201ENST00000302085 FSD1Q9BTV5 496 aa27.01■■□□□ 1.91
SMAD1-201ENST00000302085 HIP1O00291 1037 aa27■■□□□ 1.91
SMAD1-201ENST00000302085 NTSR2O95665 410 aa27■■□□□ 1.91
SMAD1-201ENST00000302085 ZNF652Q9Y2D9 606 aa27■■□□□ 1.91
SMAD1-201ENST00000302085 K7ELQ4 463 aaPredicted RBP27■■□□□ 1.91
SMAD1-201ENST00000302085 RPS6KA4O75676 772 aa27■■□□□ 1.91
SMAD1-201ENST00000302085 IL17RAQ96F46 866 aa27■■□□□ 1.91
SMAD1-201ENST00000302085 NDUFB9Q9Y6M9 179 aa27■■□□□ 1.91
SMAD1-201ENST00000302085 RAD50Q92878 1312 aa26.99■■□□□ 1.91
SMAD1-201ENST00000302085 HSPA4P34932 840 aa26.99■■□□□ 1.91
SMAD1-201ENST00000302085 ANAPC15P60006 121 aa26.99■■□□□ 1.91
SMAD1-201ENST00000302085 NMIQ13287 307 aaPredicted RBP26.99■■□□□ 1.91
SMAD1-201ENST00000302085 LDHAL6AQ6ZMR3 332 aa26.99■■□□□ 1.91
SMAD1-201ENST00000302085 BCORQ6W2J9 1755 aa26.99■■□□□ 1.91
SMAD1-201ENST00000302085 KIAA1211Q6ZU35 1233 aa26.98■■□□□ 1.91
SMAD1-201ENST00000302085 FAM227BQ96M60 508 aa26.98■■□□□ 1.91
SMAD1-201ENST00000302085 AKAP2Q9Y2D5 859 aa26.98■■□□□ 1.91
SMAD1-201ENST00000302085 DNAJC2Q99543 621 aaKnown RBP26.97■■□□□ 1.91
SMAD1-201ENST00000302085 BCL11BQ9C0K0 894 aaPredicted RBP26.97■■□□□ 1.91
SMAD1-201ENST00000302085 BCL2L12Q9HB09 334 aa26.97■■□□□ 1.91
SMAD1-201ENST00000302085 SNRKQ9NRH2 765 aa26.96■■□□□ 1.91
SMAD1-201ENST00000302085 RIC1Q4ADV7 1423 aa26.96■■□□□ 1.91
SMAD1-201ENST00000302085 RGL2O15211 777 aa26.95■■□□□ 1.91
SMAD1-201ENST00000302085 GNPATO15228 680 aa26.95■■□□□ 1.91
SMAD1-201ENST00000302085 PTH1RQ03431 593 aa26.95■■□□□ 1.91
SMAD1-201ENST00000302085 CNNM1Q9NRU3 951 aa26.95■■□□□ 1.91
SMAD1-201ENST00000302085 LY75O60449 1722 aa26.95■■□□□ 1.9
SMAD1-201ENST00000302085 A0A0D9SFI3 127 aa26.95■■□□□ 1.9
SMAD1-201ENST00000302085 ADORA1P30542 326 aa26.95■■□□□ 1.9
SMAD1-201ENST00000302085 METTL24Q5JXM2 366 aa26.95■■□□□ 1.9
SMAD1-201ENST00000302085 XAGE2Q96GT9 111 aa26.95■■□□□ 1.9
SMAD1-201ENST00000302085 NARFQ9UHQ1 456 aa26.95■■□□□ 1.9
SMAD1-201ENST00000302085 ST18O60284 1047 aa26.93■■□□□ 1.9
SMAD1-201ENST00000302085 DDIT3P35638 169 aa26.93■■□□□ 1.9
SMAD1-201ENST00000302085 NFKBIBQ15653 356 aa26.93■■□□□ 1.9
SMAD1-201ENST00000302085 USPL1Q5W0Q7 1092 aa26.93■■□□□ 1.9
SMAD1-201ENST00000302085 AMIGO3Q86WK7 504 aa26.93■■□□□ 1.9
SMAD1-201ENST00000302085 VGLL2Q8N8G2 317 aa26.93■■□□□ 1.9
SMAD1-201ENST00000302085 SRP68Q9UHB9 627 aaKnown RBP26.93■■□□□ 1.9
SMAD1-201ENST00000302085 DDX60Q8IY21 1712 aaKnown RBP26.93■■□□□ 1.9
SMAD1-201ENST00000302085 NEK4P51957 841 aa26.92■■□□□ 1.9
SMAD1-201ENST00000302085 DDX46Q7L014 1031 aaKnown RBP26.92■■□□□ 1.9
SMAD1-201ENST00000302085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.92■■□□□ 1.9
SMAD1-201ENST00000302085 HSP90B1P14625 803 aaKnown RBP26.91■■□□□ 1.9
SMAD1-201ENST00000302085 TBC1D9BQ66K14 1250 aa26.91■■□□□ 1.9
SMAD1-201ENST00000302085 SEC31BQ9NQW1 1179 aa26.91■■□□□ 1.9
SMAD1-201ENST00000302085 RTCBQ9Y3I0 505 aaKnown RBP26.91■■□□□ 1.9
SMAD1-201ENST00000302085 IFIT1P09914 478 aaKnown RBP26.91■■□□□ 1.9
SMAD1-201ENST00000302085 ATP2B3Q16720 1220 aa26.91■■□□□ 1.9
SMAD1-201ENST00000302085 KBTBD3Q8NAB2 608 aa26.91■■□□□ 1.9
SMAD1-201ENST00000302085 PAG1Q9NWQ8 432 aa26.91■■□□□ 1.9
SMAD1-201ENST00000302085 SNX14Q9Y5W7 946 aa26.91■■□□□ 1.9
SMAD1-201ENST00000302085 TAF1LQ8IZX4 1826 aa26.9■■□□□ 1.9
SMAD1-201ENST00000302085 RFX7Q2KHR2 1363 aa26.9■■□□□ 1.9
SMAD1-201ENST00000302085 GOLIM4O00461 696 aa26.9■■□□□ 1.9
SMAD1-201ENST00000302085 RASEFQ8IZ41 740 aa26.9■■□□□ 1.9
SMAD1-201ENST00000302085 CCDC171Q6TFL3 1326 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms