RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
TRUB1-201ENST00000298746 KIDINS220Q9ULH0 1771 aa13.34□□□□□ -0.27
TRUB1-201ENST00000298746 A0A0D9SFI3 127 aa13.34□□□□□ -0.27
TRUB1-201ENST00000298746 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
TRUB1-201ENST00000298746 NECTIN1Q15223 517 aa13.34□□□□□ -0.27
TRUB1-201ENST00000298746 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
TRUB1-201ENST00000298746 CTAGE5O15320 804 aa13.33□□□□□ -0.27
TRUB1-201ENST00000298746 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.27
TRUB1-201ENST00000298746 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.27
TRUB1-201ENST00000298746 NEK1Q96PY6 1258 aa13.33□□□□□ -0.27
TRUB1-201ENST00000298746 GSDMDP57764 484 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 COL9A3Q14050 684 aaPredicted RBP13.33□□□□□ -0.28
TRUB1-201ENST00000298746 STK38Q15208 465 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 IFNKQ9P0W0 207 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 GPS2Q13227 327 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
TRUB1-201ENST00000298746 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
TRUB1-201ENST00000298746 PDILTQ8N807 584 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 TMEM51Q9NW97 253 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 MAP3K2Q9Y2U5 619 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 CRB1P82279 1406 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
TRUB1-201ENST00000298746 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
TRUB1-201ENST00000298746 KLHDC4Q8TBB5 520 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 MRFAP1L1Q96HT8 127 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 A0A1B0GVL5 298 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 SERPINC1P01008 464 aa13.32□□□□□ -0.28
TRUB1-201ENST00000298746 ZSCAN16Q9H4T2 348 aaPredicted RBP13.32□□□□□ -0.28
TRUB1-201ENST00000298746 MAP4K1Q92918 833 aa13.31□□□□□ -0.28
TRUB1-201ENST00000298746 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
TRUB1-201ENST00000298746 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
TRUB1-201ENST00000298746 PRR36Q9H6K5 1346 aa13.31□□□□□ -0.28
TRUB1-201ENST00000298746 DLG5Q8TDM6 1919 aa13.31□□□□□ -0.28
TRUB1-201ENST00000298746 POLA2Q14181 598 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 KRT32Q14532 448 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 CCDC34Q96HJ3 373 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 RBM6P78332 1123 aaKnown RBP13.3□□□□□ -0.28
TRUB1-201ENST00000298746 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 LMOD2Q6P5Q4 547 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 EAF2Q96CJ1 260 aaPredicted RBP13.3□□□□□ -0.28
TRUB1-201ENST00000298746 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
TRUB1-201ENST00000298746 XPO4Q9C0E2 1151 aaKnown RBP13.3□□□□□ -0.28
TRUB1-201ENST00000298746 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 SYNE3Q6ZMZ3 975 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 ZNF589Q86UQ0 364 aaPredicted RBP13.29□□□□□ -0.28
TRUB1-201ENST00000298746 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 NCOA5Q9HCD5 579 aaKnown RBP13.29□□□□□ -0.28
TRUB1-201ENST00000298746 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 CPS1P31327 1500 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 CLCN6P51797 869 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 KIF20BQ96Q89 1820 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 ZSWIM4Q9H7M6 989 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 TLR7Q9NYK1 1049 aaKnown RBP13.29□□□□□ -0.28
TRUB1-201ENST00000298746 HNRNPH2P55795 449 aaKnown RBP13.29□□□□□ -0.28
TRUB1-201ENST00000298746 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 TOB2Q14106 344 aaPredicted RBP13.29□□□□□ -0.28
TRUB1-201ENST00000298746 IQCB1Q15051 598 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 MPRIPQ6WCQ1 1025 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 NEUROD6Q96NK8 337 aa13.29□□□□□ -0.28
TRUB1-201ENST00000298746 KCNQ3O43525 872 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 CDC25BP30305 580 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 ABTB2Q8N961 1025 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 CARD6Q9BX69 1037 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 METP08581 1390 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 PTPN21Q16825 1174 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRUB1-201ENST00000298746 ABCA9Q8IUA7 1624 aa13.28□□□□□ -0.28
TRUB1-201ENST00000298746 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 CPLX1O14810 134 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 SEC31AO94979 1220 aaKnown RBP13.27□□□□□ -0.28
TRUB1-201ENST00000298746 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.28
TRUB1-201ENST00000298746 CCZ1BP86790 482 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 CCZ1P86791 482 aaPredicted RBP13.27□□□□□ -0.28
TRUB1-201ENST00000298746 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 ALKQ9UM73 1620 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 RESTQ13127 1097 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.28
TRUB1-201ENST00000298746 MRPS27Q92552 414 aaKnown RBP13.27□□□□□ -0.28
TRUB1-201ENST00000298746 PPP1R13BQ96KQ4 1090 aa13.27□□□□□ -0.28
TRUB1-201ENST00000298746 FLT4P35916 1363 aa13.27□□□□□ -0.29
TRUB1-201ENST00000298746 NYAP1Q6ZVC0 841 aa13.27□□□□□ -0.29
TRUB1-201ENST00000298746 IL17RAQ96F46 866 aa13.27□□□□□ -0.29
TRUB1-201ENST00000298746 SEC62Q99442 399 aaKnown RBP13.27□□□□□ -0.29
TRUB1-201ENST00000298746 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
TRUB1-201ENST00000298746 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms