RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 ERC1Q8IUD2 1116 aa16.96■□□□□ 0.31
KDM1B-201ENST00000297792 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
KDM1B-201ENST00000297792 MYD88Q99836 296 aa16.96■□□□□ 0.31
KDM1B-201ENST00000297792 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
KDM1B-201ENST00000297792 NECTIN1Q15223 517 aa16.96■□□□□ 0.31
KDM1B-201ENST00000297792 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 GRM8O00222 908 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 PTCD1O75127 700 aaKnown RBP16.95■□□□□ 0.3
KDM1B-201ENST00000297792 ZNF771Q7L3S4 317 aaPredicted RBP16.95■□□□□ 0.3
KDM1B-201ENST00000297792 SCAND2PQ9GZW5 306 aaPredicted RBP16.95■□□□□ 0.3
KDM1B-201ENST00000297792 A0A0U1RQG5 324 aaPredicted RBP16.95■□□□□ 0.3
KDM1B-201ENST00000297792 NEXNQ0ZGT2 675 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 Q6ZUG5 572 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 SASH1O94885 1247 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 CCDC112Q8NEF3 446 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
KDM1B-201ENST00000297792 ME1P48163 572 aa16.94■□□□□ 0.3
KDM1B-201ENST00000297792 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
KDM1B-201ENST00000297792 FUCA2Q9BTY2 467 aa16.94■□□□□ 0.3
KDM1B-201ENST00000297792 PLEKHO1Q53GL0 409 aaPredicted RBP16.94■□□□□ 0.3
KDM1B-201ENST00000297792 IP6K1Q92551 441 aa16.94■□□□□ 0.3
KDM1B-201ENST00000297792 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
KDM1B-201ENST00000297792 USP16Q9Y5T5 823 aa16.94■□□□□ 0.3
KDM1B-201ENST00000297792 DDX58O95786 925 aaKnown RBP16.93■□□□□ 0.3
KDM1B-201ENST00000297792 RPS6KB1P23443 525 aa16.93■□□□□ 0.3
KDM1B-201ENST00000297792 NCOA5Q9HCD5 579 aaKnown RBP16.93■□□□□ 0.3
KDM1B-201ENST00000297792 ISM2Q6H9L7 571 aa16.93■□□□□ 0.3
KDM1B-201ENST00000297792 TPM3P06753 285 aa16.93■□□□□ 0.3
KDM1B-201ENST00000297792 PRDM4Q9UKN5 801 aa16.93■□□□□ 0.3
KDM1B-201ENST00000297792 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 ADCY9O60503 1353 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 PIK3C2AO00443 1686 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 SF3A1Q15459 793 aaKnown RBP16.92■□□□□ 0.3
KDM1B-201ENST00000297792 CCDC73Q6ZRK6 1079 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 SDF4Q9BRK5 362 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 BIN1O00499 593 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
KDM1B-201ENST00000297792 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 GCP02774 474 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 ZNF75DP51815 510 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 ZSCAN25Q6NSZ9 544 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 CACTINQ8WUQ7 758 aaKnown RBP16.91■□□□□ 0.3
KDM1B-201ENST00000297792 SPTLC3Q9NUV7 552 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 HIP1O00291 1037 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 GORABQ5T7V8 394 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 DDX19AQ9NUU7 478 aaKnown RBP16.91■□□□□ 0.3
KDM1B-201ENST00000297792 CCAR1Q8IX12 1150 aaKnown RBP16.91■□□□□ 0.3
KDM1B-201ENST00000297792 PGBD1Q96JS3 809 aa16.91■□□□□ 0.3
KDM1B-201ENST00000297792 KINO60870 393 aaKnown RBP16.9■□□□□ 0.3
KDM1B-201ENST00000297792 APOBRQ0VD83 1088 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
KDM1B-201ENST00000297792 CCDC144BQ3MJ40 725 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 CCDC144CPQ8IYA2 1237 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 CCDC85AQ96PX6 553 aaPredicted RBP16.9■□□□□ 0.3
KDM1B-201ENST00000297792 TFCP2Q12800 502 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 OTUD7BQ6GQQ9 843 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 XAGE3Q8WTP9 111 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
KDM1B-201ENST00000297792 SMC2O95347 1197 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 CSB-PGBD3P0DP91 1061 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 C11orf57Q6ZUT1 292 aaPredicted RBP16.89■□□□□ 0.29
KDM1B-201ENST00000297792 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
KDM1B-201ENST00000297792 GIGYF1O75420 1035 aaPredicted RBP16.89■□□□□ 0.29
KDM1B-201ENST00000297792 EPHA10Q5JZY3 1008 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 CLSTN2Q9H4D0 955 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 HDAC5Q9UQL6 1122 aa16.89■□□□□ 0.29
KDM1B-201ENST00000297792 GOLIM4O00461 696 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 USP27XA6NNY8 438 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 HAND2P61296 217 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 LINS1Q8NG48 757 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 POLR3DP05423 398 aaPredicted RBP16.88■□□□□ 0.29
KDM1B-201ENST00000297792 SKILP12757 684 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 ZBTB9Q96C00 473 aa16.88■□□□□ 0.29
KDM1B-201ENST00000297792 CHRNA2Q15822 529 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 FSIP1Q8NA03 581 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 ZSCAN20P17040 1043 aaPredicted RBP16.87■□□□□ 0.29
KDM1B-201ENST00000297792 AKAP4Q5JQC9 854 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 AOPEPQ8N6M6 819 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
KDM1B-201ENST00000297792 EPB41L2O43491 1005 aaKnown RBP16.86■□□□□ 0.29
KDM1B-201ENST00000297792 NFATC2IPQ8NCF5 419 aa16.86■□□□□ 0.29
KDM1B-201ENST00000297792 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
KDM1B-201ENST00000297792 PTPN14Q15678 1187 aa16.86■□□□□ 0.29
KDM1B-201ENST00000297792 CFAP45Q9UL16 551 aa16.86■□□□□ 0.29
KDM1B-201ENST00000297792 NWD1Q149M9 1564 aa16.86■□□□□ 0.29
KDM1B-201ENST00000297792 NCBP1Q09161 790 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms