RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 ITPK1Q13572 414 aa15.86■□□□□ 0.13
PPP1CB-201ENST00000296122 C5P01031 1676 aa15.86■□□□□ 0.13
PPP1CB-201ENST00000296122 CDHR2Q9BYE9 1310 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 A0A1B0GUL7 405 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 CASP7P55210 303 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 FGD1P98174 961 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 ATP2B3Q16720 1220 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 TLR7Q9NYK1 1049 aaKnown RBP15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 COL15A1P39059 1388 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 ATP5JP18859 108 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 KCNQ4P56696 695 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 SETDB2Q96T68 719 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 RFX5P48382 616 aaPredicted RBP15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 GPR108Q9NPR9 543 aa15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 DBNLQ9UJU6 430 aaKnown RBP15.85■□□□□ 0.13
PPP1CB-201ENST00000296122 SGSM2O43147 1006 aa15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 ANAPC15P60006 121 aa15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 USP42Q9H9J4 1324 aaKnown RBP15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 GOLIM4O00461 696 aa15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 PHF14O94880 888 aa15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 INTS5Q6P9B9 1019 aaKnown RBP15.84■□□□□ 0.13
PPP1CB-201ENST00000296122 WASHC4Q2M389 1173 aa15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 DDX46Q7L014 1031 aaKnown RBP15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 NBPF5PQ86XG9 351 aaPredicted RBP15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 PLA2G12BQ9BX93 195 aa15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 GREM2Q9H772 168 aa15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 PLCH1Q4KWH8 1693 aa15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
PPP1CB-201ENST00000296122 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 PUS3Q9BZE2 481 aaKnown RBP15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 CLEC4GQ6UXB4 293 aa15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 FAM196AQ6ZSG2 479 aa15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 SYNE4Q8N205 404 aa15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 RAD50Q92878 1312 aa15.82■□□□□ 0.12
PPP1CB-201ENST00000296122 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 SLC5A1P13866 664 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 PSMA5P28066 241 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 TRAPPC3LQ5T215 181 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 ZNF34Q8IZ26 560 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 PAG1Q9NWQ8 432 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 GBP4Q96PP9 640 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 LAMB4A4D0S4 1761 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 NFKBIBQ15653 356 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 KRT27Q7Z3Y8 459 aa15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
PPP1CB-201ENST00000296122 PRPF40BQ6NWY9 871 aaKnown RBP15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 TPTE2Q6XPS3 522 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 RPS6KA4O75676 772 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 CAMTA2O94983 1202 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 NLRP3Q96P20 1036 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 SNRKQ9NRH2 765 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 LRP6O75581 1613 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 LINC00116Q8NCU8 138 aa15.8■□□□□ 0.12
PPP1CB-201ENST00000296122 ZNF772Q68DY9 489 aaPredicted RBP15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 ZSCAN25Q6NSZ9 544 aa15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 IL27Q8NEV9 243 aa15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 XAGE2Q96GT9 111 aa15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 CSF1RP07333 972 aa15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 USPL1Q5W0Q7 1092 aa15.79■□□□□ 0.12
PPP1CB-201ENST00000296122 ATG9AQ7Z3C6 839 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 HAUS7Q99871 368 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 CYP46A1Q9Y6A2 500 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 RC3H1Q5TC82 1133 aaKnown RBP15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 CIZ1Q9ULV3 898 aaPredicted RBP15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 CNTNAP4Q9C0A0 1308 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 NWD2Q9ULI1 1742 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 KBTBD3Q8NAB2 608 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 HELBQ8NG08 1087 aaPredicted RBP15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 FAM227BQ96M60 508 aa15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 JAKMIP1Q96N16 626 aaKnown RBP15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 GNL3LQ9NVN8 582 aaKnown RBP15.78■□□□□ 0.12
PPP1CB-201ENST00000296122 MROH5Q6ZUA9 1318 aa15.77■□□□□ 0.12
PPP1CB-201ENST00000296122 CCDC171Q6TFL3 1326 aa15.77■□□□□ 0.12
PPP1CB-201ENST00000296122 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
PPP1CB-201ENST00000296122 NDUFB9Q9Y6M9 179 aa15.77■□□□□ 0.12
PPP1CB-201ENST00000296122 MCMDC2Q4G0Z9 681 aa15.77■□□□□ 0.11
PPP1CB-201ENST00000296122 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 NUCB2P80303 420 aa15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 TTF1Q15361 905 aaPredicted RBP15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 NARFQ9UHQ1 456 aa15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 RBM8AQ9Y5S9 174 aaKnown RBP15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 IDH1O75874 414 aaKnown RBP15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 ZFYP08048 801 aaPredicted RBP15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 CASTP20810 708 aaKnown RBP15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 HSPA4P34932 840 aa15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 KRT32Q14532 448 aa15.76■□□□□ 0.11
PPP1CB-201ENST00000296122 CWC22Q9HCG8 908 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms