RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LRRC4BQ9NT99 713 aa27.95■■■□□ 2.06
PTX3-201ENST00000295927 FPGT-TNNI3KV9GXZ4 949 aa27.95■■■□□ 2.06
PTX3-201ENST00000295927 RGL2O15211 777 aa27.94■■■□□ 2.06
PTX3-201ENST00000295927 CIAO1O76071 339 aa27.94■■■□□ 2.06
PTX3-201ENST00000295927 IFIT5Q13325 482 aaKnown RBP27.94■■■□□ 2.06
PTX3-201ENST00000295927 LRRC24Q50LG9 513 aa27.94■■■□□ 2.06
PTX3-201ENST00000295927 EIF5BO60841 1220 aaKnown RBP27.94■■■□□ 2.06
PTX3-201ENST00000295927 MAP4K4O95819 1239 aaPredicted RBP27.94■■■□□ 2.06
PTX3-201ENST00000295927 AK7Q96M32 723 aa27.94■■■□□ 2.06
PTX3-201ENST00000295927 NARFQ9UHQ1 456 aa27.94■■■□□ 2.06
PTX3-201ENST00000295927 DDX60Q8IY21 1712 aaKnown RBP27.93■■■□□ 2.06
PTX3-201ENST00000295927 EP400Q96L91 3159 aa27.93■■■□□ 2.06
PTX3-201ENST00000295927 NTSR2O95665 410 aa27.93■■■□□ 2.06
PTX3-201ENST00000295927 PUS3Q9BZE2 481 aaKnown RBP27.93■■■□□ 2.06
PTX3-201ENST00000295927 GREM2Q9H772 168 aa27.93■■■□□ 2.06
PTX3-201ENST00000295927 AMIGO3Q86WK7 504 aa27.92■■■□□ 2.06
PTX3-201ENST00000295927 BCL2L12Q9HB09 334 aa27.92■■■□□ 2.06
PTX3-201ENST00000295927 LAMB2P55268 1798 aa27.92■■■□□ 2.06
PTX3-201ENST00000295927 RXRBP28702 533 aa27.92■■■□□ 2.06
PTX3-201ENST00000295927 USPL1Q5W0Q7 1092 aa27.92■■■□□ 2.06
PTX3-201ENST00000295927 FBXO3Q9UK99 471 aa27.92■■■□□ 2.06
PTX3-201ENST00000295927 ITGA6P23229 1130 aa27.91■■■□□ 2.06
PTX3-201ENST00000295927 TAF7LQ5H9L4 462 aa27.91■■■□□ 2.06
PTX3-201ENST00000295927 SRP68Q9UHB9 627 aaKnown RBP27.91■■■□□ 2.06
PTX3-201ENST00000295927 C4AP0C0L4 1744 aa27.9■■■□□ 2.06
PTX3-201ENST00000295927 HCLS1P14317 486 aaPredicted RBP27.9■■■□□ 2.06
PTX3-201ENST00000295927 RBM25P49756 843 aaKnown RBP27.9■■■□□ 2.06
PTX3-201ENST00000295927 ARHGEF1Q92888 912 aaKnown RBP27.9■■■□□ 2.06
PTX3-201ENST00000295927 GPR108Q9NPR9 543 aa27.9■■■□□ 2.06
PTX3-201ENST00000295927 DBNLQ9UJU6 430 aaKnown RBP27.9■■■□□ 2.06
PTX3-201ENST00000295927 ANKRD18BA2A2Z9 1011 aa27.89■■■□□ 2.06
PTX3-201ENST00000295927 ZPR1O75312 459 aa27.89■■■□□ 2.06
PTX3-201ENST00000295927 CHMLP26374 656 aa27.89■■■□□ 2.06
PTX3-201ENST00000295927 SLC27A3Q5K4L6 730 aa27.89■■■□□ 2.06
PTX3-201ENST00000295927 CNTROBQ8N137 903 aa27.89■■■□□ 2.06
PTX3-201ENST00000295927 TBC1D9BQ66K14 1250 aa27.88■■■□□ 2.05
PTX3-201ENST00000295927 DBNDD2Q9BQY9 259 aa27.86■■■□□ 2.05
PTX3-201ENST00000295927 UBR3Q6ZT12 1888 aa27.86■■■□□ 2.05
PTX3-201ENST00000295927 HSP90B1P14625 803 aaKnown RBP27.86■■■□□ 2.05
PTX3-201ENST00000295927 TRAPPC3LQ5T215 181 aa27.86■■■□□ 2.05
PTX3-201ENST00000295927 BICDL1Q6ZP65 573 aa27.86■■■□□ 2.05
PTX3-201ENST00000295927 FBXO41Q8TF61 875 aa27.86■■■□□ 2.05
PTX3-201ENST00000295927 CEP126Q9P2H0 1117 aa27.86■■■□□ 2.05
PTX3-201ENST00000295927 PHF14O94880 888 aa27.85■■■□□ 2.05
PTX3-201ENST00000295927 ESYT1Q9BSJ8 1104 aa27.85■■■□□ 2.05
PTX3-201ENST00000295927 RGS17Q9UGC6 210 aaPredicted RBP27.85■■■□□ 2.05
PTX3-201ENST00000295927 ZNF609O15014 1411 aa27.85■■■□□ 2.05
PTX3-201ENST00000295927 COL24A1Q17RW2 1714 aa27.84■■■□□ 2.05
PTX3-201ENST00000295927 RFC4P35249 363 aa27.84■■■□□ 2.05
PTX3-201ENST00000295927 LDHAL6AQ6ZMR3 332 aa27.84■■■□□ 2.05
PTX3-201ENST00000295927 BOLA2Q9H3K6 86 aa27.84■■■□□ 2.05
PTX3-201ENST00000295927 TIMM10P62072 90 aa27.83■■■□□ 2.05
PTX3-201ENST00000295927 NEUROD6Q96NK8 337 aa27.83■■■□□ 2.05
PTX3-201ENST00000295927 USP26Q9BXU7 913 aa27.83■■■□□ 2.05
PTX3-201ENST00000295927 RIPOR2Q9Y4F9 1068 aa27.83■■■□□ 2.05
PTX3-201ENST00000295927 REC8O95072 547 aa27.82■■■□□ 2.04
PTX3-201ENST00000295927 ATP5JP18859 108 aa27.82■■■□□ 2.04
PTX3-201ENST00000295927 ERFEQ4G0M1 354 aa27.82■■■□□ 2.04
PTX3-201ENST00000295927 EVI5LQ96CN4 794 aa27.82■■■□□ 2.04
PTX3-201ENST00000295927 SETDB2Q96T68 719 aa27.82■■■□□ 2.04
PTX3-201ENST00000295927 CASZ1Q86V15 1759 aa27.81■■■□□ 2.04
PTX3-201ENST00000295927 ADRA2BP18089 450 aa27.81■■■□□ 2.04
PTX3-201ENST00000295927 RIC1Q4ADV7 1423 aa27.81■■■□□ 2.04
PTX3-201ENST00000295927 PROM2Q8N271 834 aa27.81■■■□□ 2.04
PTX3-201ENST00000295927 LRP5O75197 1615 aa27.81■■■□□ 2.04
PTX3-201ENST00000295927 A0A1B0GUL7 405 aa27.8■■■□□ 2.04
PTX3-201ENST00000295927 TXNRD1Q16881 649 aa27.8■■■□□ 2.04
PTX3-201ENST00000295927 CCDC152Q4G0S7 254 aa27.8■■■□□ 2.04
PTX3-201ENST00000295927 CNNM1Q9NRU3 951 aa27.8■■■□□ 2.04
PTX3-201ENST00000295927 AKAP2Q9Y2D5 859 aa27.8■■■□□ 2.04
PTX3-201ENST00000295927 POTEAQ6S8J7 498 aa27.79■■■□□ 2.04
PTX3-201ENST00000295927 RTL9Q8NET4 1388 aa27.79■■■□□ 2.04
PTX3-201ENST00000295927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.79■■■□□ 2.04
PTX3-201ENST00000295927 METTL24Q5JXM2 366 aa27.79■■■□□ 2.04
PTX3-201ENST00000295927 NYXQ9GZU5 481 aa27.79■■■□□ 2.04
PTX3-201ENST00000295927 SLC4A3P48751 1232 aa27.78■■■□□ 2.04
PTX3-201ENST00000295927 SEC31BQ9NQW1 1179 aa27.78■■■□□ 2.04
PTX3-201ENST00000295927 SPEF2Q9C093 1822 aa27.77■■■□□ 2.04
PTX3-201ENST00000295927 PLSCR1O15162 318 aa27.77■■■□□ 2.04
PTX3-201ENST00000295927 GTF2E1P29083 439 aaPredicted RBP27.77■■■□□ 2.04
PTX3-201ENST00000295927 KIF2CQ99661 725 aa27.77■■■□□ 2.04
PTX3-201ENST00000295927 APBA3O96018 575 aa27.76■■■□□ 2.03
PTX3-201ENST00000295927 SLC10A5Q5PT55 438 aa27.76■■■□□ 2.03
PTX3-201ENST00000295927 NBPF5PQ86XG9 351 aaPredicted RBP27.76■■■□□ 2.03
PTX3-201ENST00000295927 DAXXQ9UER7 740 aaPredicted RBP27.76■■■□□ 2.03
PTX3-201ENST00000295927 IL25Q9H293 177 aa27.75■■■□□ 2.03
PTX3-201ENST00000295927 ABCC12Q96J65 1359 aa27.75■■■□□ 2.03
PTX3-201ENST00000295927 SSFA2P28290 1259 aa27.75■■■□□ 2.03
PTX3-201ENST00000295927 DIAPH3Q9NSV4 1193 aa27.75■■■□□ 2.03
PTX3-201ENST00000295927 HMGB2P26583 209 aaKnown RBP27.74■■■□□ 2.03
PTX3-201ENST00000295927 BECN1Q14457 450 aa27.74■■■□□ 2.03
PTX3-201ENST00000295927 C3orf67Q6ZVT6 689 aa27.74■■■□□ 2.03
PTX3-201ENST00000295927 VGLL2Q8N8G2 317 aa27.74■■■□□ 2.03
PTX3-201ENST00000295927 HAUS7Q99871 368 aa27.74■■■□□ 2.03
PTX3-201ENST00000295927 SGSM2O43147 1006 aa27.73■■■□□ 2.03
PTX3-201ENST00000295927 SF3B3Q15393 1217 aaKnown RBP27.73■■■□□ 2.03
PTX3-201ENST00000295927 CWC27Q6UX04 472 aaKnown RBP27.73■■■□□ 2.03
PTX3-201ENST00000295927 XAGE2Q96GT9 111 aa27.73■■■□□ 2.03
PTX3-201ENST00000295927 ATP2B3Q16720 1220 aa27.73■■■□□ 2.03
PTX3-201ENST00000295927 TPTE2Q6XPS3 522 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms