RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 RIMS2Q9UQ26 1411 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 MNAT1P51948 309 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 DHX37Q8IY37 1157 aaKnown RBP11.84□□□□□ -0.51
CLDN1-201ENST00000295522 BANK1Q8NDB2 785 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 RBM8AQ9Y5S9 174 aaKnown RBP11.84□□□□□ -0.51
CLDN1-201ENST00000295522 SBNO2Q9Y2G9 1366 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 KARSQ15046 597 aaKnown RBP11.84□□□□□ -0.51
CLDN1-201ENST00000295522 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 CC2D1AQ6P1N0 951 aaPredicted RBP11.84□□□□□ -0.51
CLDN1-201ENST00000295522 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 PACS2Q86VP3 889 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
CLDN1-201ENST00000295522 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
CLDN1-201ENST00000295522 RHPN1Q8TCX5 695 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 FAM53CQ9NYF3 392 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 CFAP45Q9UL16 551 aa11.84□□□□□ -0.51
CLDN1-201ENST00000295522 ELP1O95163 1332 aa11.83□□□□□ -0.51
CLDN1-201ENST00000295522 CDC25BP30305 580 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 COL9A3Q14050 684 aaPredicted RBP11.83□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 ARMCX5Q6P1M9 558 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 GEMIN8Q9NWZ8 242 aaKnown RBP11.83□□□□□ -0.52
CLDN1-201ENST00000295522 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
CLDN1-201ENST00000295522 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
CLDN1-201ENST00000295522 EIF3CQ99613 913 aaKnown RBP11.83□□□□□ -0.52
CLDN1-201ENST00000295522 CAVIN2O95810 425 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 IVLP07476 585 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 PSMA5P28066 241 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 ST3GAL1Q11201 340 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 FLIIQ13045 1269 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
CLDN1-201ENST00000295522 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
CLDN1-201ENST00000295522 DNAAF4Q8WXU2 420 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 NCAPGQ9BPX3 1015 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 L2HGDHQ9H9P8 463 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 SSH2Q76I76 1423 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 REREQ9P2R6 1566 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 FOXO3O43524 673 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 ZRANB2O95218 330 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLDN1-201ENST00000295522 TPM1P09493 284 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 RHOXF2BP0C7M4 288 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 COG3Q96JB2 828 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 TRPM2O94759 1503 aa11.82□□□□□ -0.52
CLDN1-201ENST00000295522 EFCAB8A8MWE9 144 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 H3BQF6 201 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 JAKMIP3Q5VZ66 844 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 CREB3L3Q68CJ9 461 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 FAM227BQ96M60 508 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 TADA3O75528 432 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 CCDC30Q5VVM6 783 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 DHX40Q8IX18 779 aaKnown RBP11.81□□□□□ -0.52
CLDN1-201ENST00000295522 FSD1Q9BTV5 496 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 SPHKAPQ2M3C7 1700 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 GUCY2CP25092 1073 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 CCT2P78371 535 aaKnown RBP11.81□□□□□ -0.52
CLDN1-201ENST00000295522 CLASRPQ8N2M8 674 aaKnown RBP11.81□□□□□ -0.52
CLDN1-201ENST00000295522 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
CLDN1-201ENST00000295522 N4BP1O75113 896 aaKnown RBP11.8□□□□□ -0.52
CLDN1-201ENST00000295522 DHX8Q14562 1220 aaKnown RBP11.8□□□□□ -0.52
CLDN1-201ENST00000295522 EXOC4Q96A65 974 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 SUGCTQ9HAC7 445 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 PATL2C9JE40 543 aaKnown RBP11.8□□□□□ -0.52
CLDN1-201ENST00000295522 CCP110O43303 1012 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 IL13P35225 146 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 SARM1Q6SZW1 724 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 DESI2Q9BSY9 194 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 GOLPH3LQ9H4A5 285 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 CTAGE5O15320 804 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 TOP1P11387 765 aaKnown RBP11.8□□□□□ -0.52
CLDN1-201ENST00000295522 REXO1L1PQ8IX06 675 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 PPM1EQ8WY54 764 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 KIF24Q5T7B8 1368 aa11.8□□□□□ -0.52
CLDN1-201ENST00000295522 KNDC1Q76NI1 1749 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 EIF3JO75822 258 aaKnown RBP11.79□□□□□ -0.52
CLDN1-201ENST00000295522 ATP1A3P13637 1013 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 MAGEA9P43362 315 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 LIG3P49916 1009 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
CLDN1-201ENST00000295522 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 UBASH3AP57075 661 aa11.79□□□□□ -0.52
CLDN1-201ENST00000295522 STK38Q15208 465 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms