RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 NECTIN1Q15223 517 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 DHX40Q8IX18 779 aaKnown RBP16.6■□□□□ 0.25
FUBP1-201ENST00000294623 PRAM1Q96QH2 718 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 ARFGAP3Q9NP61 516 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 MINK1Q8N4C8 1332 aaPredicted RBP16.6■□□□□ 0.25
FUBP1-201ENST00000294623 POTEB2H3BUK9 544 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 MYO1BO43795 1136 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 CC2D1AQ6P1N0 951 aaPredicted RBP16.6■□□□□ 0.25
FUBP1-201ENST00000294623 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 CCDC73Q6ZRK6 1079 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 PGBD1Q96JS3 809 aa16.6■□□□□ 0.25
FUBP1-201ENST00000294623 TBC1D8O95759 1140 aa16.59■□□□□ 0.25
FUBP1-201ENST00000294623 BRD3Q15059 726 aa16.59■□□□□ 0.25
FUBP1-201ENST00000294623 C11orf57Q6ZUT1 292 aaPredicted RBP16.59■□□□□ 0.25
FUBP1-201ENST00000294623 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
FUBP1-201ENST00000294623 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
FUBP1-201ENST00000294623 AKAP12Q02952 1782 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 C3P01024 1663 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 ZSCAN12O43309 604 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 RESTQ13127 1097 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 RABGGTAQ92696 567 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 GPATCH3Q96I76 525 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 HMG20BQ9P0W2 317 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 LRRC37A3O60309 1634 aa16.58■□□□□ 0.25
FUBP1-201ENST00000294623 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
FUBP1-201ENST00000294623 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
FUBP1-201ENST00000294623 TTC31Q49AM3 519 aaPredicted RBP16.58■□□□□ 0.24
FUBP1-201ENST00000294623 CCDC30Q5VVM6 783 aa16.58■□□□□ 0.24
FUBP1-201ENST00000294623 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
FUBP1-201ENST00000294623 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
FUBP1-201ENST00000294623 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.24
FUBP1-201ENST00000294623 ALKQ9UM73 1620 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 ARID5BQ14865 1188 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 PPM1EQ8WY54 764 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 CHMP4CQ96CF2 233 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 COG3Q96JB2 828 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 FAM107BQ9H098 131 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 RCOR1Q9UKL0 485 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 CHMP3Q9Y3E7 222 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 ADCY9O60503 1353 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 CCDC151A5D8V7 595 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 UBTFL1P0CB47 393 aaPredicted RBP16.57■□□□□ 0.24
FUBP1-201ENST00000294623 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 SUGP1Q8IWZ8 645 aaKnown RBP16.57■□□□□ 0.24
FUBP1-201ENST00000294623 C10orf67Q8IYJ2 551 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 HNRNPLLQ8WVV9 542 aaKnown RBP16.57■□□□□ 0.24
FUBP1-201ENST00000294623 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 BABAM1Q9NWV8 329 aa16.57■□□□□ 0.24
FUBP1-201ENST00000294623 SMC2O95347 1197 aa16.56■□□□□ 0.24
FUBP1-201ENST00000294623 CPP00450 1065 aa16.56■□□□□ 0.24
FUBP1-201ENST00000294623 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
FUBP1-201ENST00000294623 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
FUBP1-201ENST00000294623 NBPF11Q86T75 865 aa16.56■□□□□ 0.24
FUBP1-201ENST00000294623 CLGNO14967 610 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 TUBBP07437 444 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 TUBB2AQ13885 445 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 KRT32Q14532 448 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 BLOC1S2Q6QNY1 142 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 ZNF396Q96N95 335 aaPredicted RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 LLPHQ9BRT6 129 aaKnown RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 TUBB2BQ9BVA1 445 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 CBFA2T2O43439 604 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 EVCP57679 992 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 ST5P78524 1137 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 FLIIQ13045 1269 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 CREB3L3Q68CJ9 461 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 CWC27Q6UX04 472 aaKnown RBP16.55■□□□□ 0.24
FUBP1-201ENST00000294623 REXO1L1PQ8IX06 675 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 EVI5LQ96CN4 794 aa16.55■□□□□ 0.24
FUBP1-201ENST00000294623 SWT1Q5T5J6 900 aaKnown RBP16.54■□□□□ 0.24
FUBP1-201ENST00000294623 FERMT3Q86UX7 667 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 ZFP91Q96JP5 570 aaPredicted RBP16.54■□□□□ 0.24
FUBP1-201ENST00000294623 STAG3Q9UJ98 1225 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 ADAM21Q9UKJ8 722 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 JRKLQ9Y4A0 524 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
FUBP1-201ENST00000294623 RSRC2Q7L4I2 434 aaKnown RBP16.54■□□□□ 0.24
FUBP1-201ENST00000294623 G2E3Q7L622 706 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 RPAINQ86UA6 219 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
FUBP1-201ENST00000294623 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 JCADQ9P266 1359 aa16.54■□□□□ 0.24
FUBP1-201ENST00000294623 F6X3S4 739 aa16.53■□□□□ 0.24
FUBP1-201ENST00000294623 MAP2K7O14733 419 aa16.53■□□□□ 0.24
FUBP1-201ENST00000294623 ADCK5Q3MIX3 580 aa16.53■□□□□ 0.24
FUBP1-201ENST00000294623 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms