RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 TSHZ3Q63HK5 1081 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 ESYT1Q9BSJ8 1104 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 TANGO6Q9C0B7 1094 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 TAX1BP1Q86VP1 789 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 UBAC1Q9BSL1 405 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 CAPN2P17655 700 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 DCTPP1Q9H773 170 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 NPATQ14207 1427 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 TDO2P48775 406 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 RHPN1Q8TCX5 695 aa20.12■□□□□ 0.81
PCDHA13-201ENST00000289272 RAI14Q9P0K7 980 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 LRP2BPQ9P2M1 347 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 MTMR7Q9Y216 660 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 CAVIN4Q5BKX8 364 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 NUP88Q99567 741 aaPredicted RBP20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 GDPD2Q9HCC8 539 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 KRT18P05783 430 aaKnown RBP20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 CCDC102BQ68D86 513 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 HDXQ7Z353 690 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 TMOD2Q9NZR1 351 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 DNAI1Q9UI46 699 aa20.11■□□□□ 0.81
PCDHA13-201ENST00000289272 SAMD1Q6SPF0 538 aaPredicted RBP20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 TAOK3Q9H2K8 898 aa20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 IDH1O75874 414 aaKnown RBP20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 IFFO1Q0D2I5 559 aa20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 NUP133Q8WUM0 1156 aa20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 A0A087WZG4 1122 aa20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 ATP8B2P98198 1209 aa20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 NSRP1Q9H0G5 558 aaKnown RBP20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 CNPY2Q9Y2B0 182 aa20.1■□□□□ 0.81
PCDHA13-201ENST00000289272 MAPK8IP2Q13387 824 aaPredicted RBP20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 AIDAQ96BJ3 306 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 ZNF830Q96NB3 372 aaPredicted RBP20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 RSPH14Q9UHP6 348 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 SEC24BO95487 1268 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 UBASH3AP57075 661 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 TSG101Q99816 390 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 IFIT5Q13325 482 aaKnown RBP20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 ARFGAP2Q8N6H7 521 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 CCDC85AQ96PX6 553 aaPredicted RBP20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 RBSNQ9H1K0 784 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 ZRANB1Q9UGI0 708 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 ARHGEF5Q12774 1597 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 BMP15O95972 392 aa20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 MRPS27Q92552 414 aaKnown RBP20.09■□□□□ 0.81
PCDHA13-201ENST00000289272 ATP7AQ04656 1500 aa20.08■□□□□ 0.81
PCDHA13-201ENST00000289272 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
PCDHA13-201ENST00000289272 DDX12PQ92771 950 aa20.08■□□□□ 0.81
PCDHA13-201ENST00000289272 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.81
PCDHA13-201ENST00000289272 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
PCDHA13-201ENST00000289272 IFI16Q16666 785 aaKnown RBP20.08■□□□□ 0.8
PCDHA13-201ENST00000289272 IBTKQ9P2D0 1353 aaPredicted RBP20.08■□□□□ 0.8
PCDHA13-201ENST00000289272 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 CETN2P41208 172 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 ZFYVE27Q5T4F4 411 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 CEP85Q6P2H3 762 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 CTAGE9A4FU28 777 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 SLF2Q8IX21 1173 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 PPM1EQ8WY54 764 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 IMPACTQ9P2X3 320 aa20.07■□□□□ 0.8
PCDHA13-201ENST00000289272 STK11IPQ8N1F8 1099 aa20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 RMND1Q9NWS8 449 aa20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 SLC5A1P13866 664 aa20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 CYLC1P35663 651 aaPredicted RBP20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
PCDHA13-201ENST00000289272 FSD2A1L4K1 749 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 ANKRD18BA2A2Z9 1011 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 FLT4P35916 1363 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 WWC2Q6AWC2 1192 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 B4GALNT4Q76KP1 1039 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 NGLY1Q96IV0 654 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 CCDC50Q8IVM0 306 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 NEK1Q96PY6 1258 aa20.05■□□□□ 0.8
PCDHA13-201ENST00000289272 SYT1P21579 422 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 PTGS1P23219 599 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 MTHFSDQ2M296 383 aaKnown RBP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 STMN4Q9H169 189 aaPredicted RBP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 DACT1Q9NYF0 836 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 TRPM2O94759 1503 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 ZBTB7BO15156 539 aaPredicted RBP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 MAP3K12Q12852 859 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 PPP1R12BO60237 982 aaPredicted RBP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 MICALL1Q8N3F8 863 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 IPO4Q8TEX9 1081 aaKnown RBP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 CHPF2Q9P2E5 772 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 MYO1BO43795 1136 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 SNRPA1P09661 255 aaKnown RBP20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 DMTNQ08495 405 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 PLEKHM2Q8IWE5 1019 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 USP26Q9BXU7 913 aa20.04■□□□□ 0.8
PCDHA13-201ENST00000289272 KDM6BO15054 1643 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms