RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 COL5A3P25940 1745 aaPredicted RBP25.9■■□□□ 1.74
GFRA3-201ENST00000274721 RAD50Q92878 1312 aa25.89■■□□□ 1.74
GFRA3-201ENST00000274721 HIP1O00291 1037 aa25.89■■□□□ 1.74
GFRA3-201ENST00000274721 HSPA4P34932 840 aa25.89■■□□□ 1.74
GFRA3-201ENST00000274721 PALD1Q9ULE6 856 aa25.89■■□□□ 1.74
GFRA3-201ENST00000274721 IRS4O14654 1257 aaPredicted RBP25.88■■□□□ 1.73
GFRA3-201ENST00000274721 ONECUT3O60422 494 aaPredicted RBP25.88■■□□□ 1.73
GFRA3-201ENST00000274721 MYT1Q01538 1121 aa25.88■■□□□ 1.73
GFRA3-201ENST00000274721 IFIT5Q13325 482 aaKnown RBP25.88■■□□□ 1.73
GFRA3-201ENST00000274721 PTF1AQ7RTS3 328 aa25.88■■□□□ 1.73
GFRA3-201ENST00000274721 CTSWP56202 376 aa25.87■■□□□ 1.73
GFRA3-201ENST00000274721 MEX3CQ5U5Q3 659 aaKnown RBP25.87■■□□□ 1.73
GFRA3-201ENST00000274721 SNRKQ9NRH2 765 aa25.87■■□□□ 1.73
GFRA3-201ENST00000274721 ST18O60284 1047 aa25.87■■□□□ 1.73
GFRA3-201ENST00000274721 PDE8AO60658 829 aa25.87■■□□□ 1.73
GFRA3-201ENST00000274721 CHMP5Q9NZZ3 219 aa25.87■■□□□ 1.73
GFRA3-201ENST00000274721 TIMM10P62072 90 aa25.86■■□□□ 1.73
GFRA3-201ENST00000274721 LINC00116Q8NCU8 138 aa25.86■■□□□ 1.73
GFRA3-201ENST00000274721 AK7Q96M32 723 aa25.86■■□□□ 1.73
GFRA3-201ENST00000274721 HAUS7Q99871 368 aa25.86■■□□□ 1.73
GFRA3-201ENST00000274721 AFF2P51816 1311 aa25.86■■□□□ 1.73
GFRA3-201ENST00000274721 MYH3P11055 1940 aa25.86■■□□□ 1.73
GFRA3-201ENST00000274721 CEP126Q9P2H0 1117 aa25.85■■□□□ 1.73
GFRA3-201ENST00000274721 ZNF609O15014 1411 aa25.85■■□□□ 1.73
GFRA3-201ENST00000274721 KIAA1211Q6ZU35 1233 aa25.85■■□□□ 1.73
GFRA3-201ENST00000274721 CCDC85AQ96PX6 553 aaPredicted RBP25.85■■□□□ 1.73
GFRA3-201ENST00000274721 GREM2Q9H772 168 aa25.85■■□□□ 1.73
GFRA3-201ENST00000274721 ITGA6P23229 1130 aa25.84■■□□□ 1.73
GFRA3-201ENST00000274721 SUSD4Q5VX71 490 aa25.84■■□□□ 1.73
GFRA3-201ENST00000274721 A0A1B0GUL7 405 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 PARP10Q53GL7 1025 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 NEUROD6Q96NK8 337 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 FSD1Q9BTV5 496 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 ATRNO75882 1429 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 CNTNAP4Q9C0A0 1308 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 IL27Q8NEV9 243 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 RIPOR2Q9Y4F9 1068 aa25.83■■□□□ 1.73
GFRA3-201ENST00000274721 NMIQ13287 307 aaPredicted RBP25.82■■□□□ 1.72
GFRA3-201ENST00000274721 EDC3Q96F86 508 aaKnown RBP25.82■■□□□ 1.72
GFRA3-201ENST00000274721 FAM227BQ96M60 508 aa25.82■■□□□ 1.72
GFRA3-201ENST00000274721 RFX7Q2KHR2 1363 aa25.82■■□□□ 1.72
GFRA3-201ENST00000274721 SH3TC1Q8TE82 1336 aa25.82■■□□□ 1.72
GFRA3-201ENST00000274721 NEK4P51957 841 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 TAF7LQ5H9L4 462 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 CLEC4GQ6UXB4 293 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 UTP14AQ9BVJ6 771 aaKnown RBP25.81■■□□□ 1.72
GFRA3-201ENST00000274721 NHSQ6T4R5 1651 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 ANKRD18BA2A2Z9 1011 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 FRAT2O75474 233 aaPredicted RBP25.81■■□□□ 1.72
GFRA3-201ENST00000274721 TRPC5Q9UL62 973 aaPredicted RBP25.81■■□□□ 1.72
GFRA3-201ENST00000274721 CIZ1Q9ULV3 898 aaPredicted RBP25.81■■□□□ 1.72
GFRA3-201ENST00000274721 AKAP2Q9Y2D5 859 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 BTAF1O14981 1849 aa25.81■■□□□ 1.72
GFRA3-201ENST00000274721 RGL2O15211 777 aa25.8■■□□□ 1.72
GFRA3-201ENST00000274721 PTH1RQ03431 593 aa25.8■■□□□ 1.72
GFRA3-201ENST00000274721 RC3H1Q5TC82 1133 aaKnown RBP25.8■■□□□ 1.72
GFRA3-201ENST00000274721 FAM182BQ5T319 152 aa25.79■■□□□ 1.72
GFRA3-201ENST00000274721 TICAM2Q86XR7 235 aa25.79■■□□□ 1.72
GFRA3-201ENST00000274721 A0A0D9SFI3 127 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 KCNQ4P56696 695 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 LDHAL6AQ6ZMR3 332 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.78■■□□□ 1.72
GFRA3-201ENST00000274721 KCNB2Q92953 911 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 NIP7Q9Y221 180 aaKnown RBP eCLIP25.78■■□□□ 1.72
GFRA3-201ENST00000274721 ZNF652Q9Y2D9 606 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 HSP90AA1P07900 732 aaKnown RBP25.78■■□□□ 1.72
GFRA3-201ENST00000274721 SNX14Q9Y5W7 946 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 NDUFB9Q9Y6M9 179 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 MED23Q9ULK4 1368 aa25.78■■□□□ 1.72
GFRA3-201ENST00000274721 CCDC171Q6TFL3 1326 aa25.77■■□□□ 1.72
GFRA3-201ENST00000274721 NTSR2O95665 410 aa25.77■■□□□ 1.72
GFRA3-201ENST00000274721 MCM2P49736 904 aa25.77■■□□□ 1.72
GFRA3-201ENST00000274721 MAP4K1Q92918 833 aa25.77■■□□□ 1.72
GFRA3-201ENST00000274721 DNAJC2Q99543 621 aaKnown RBP25.77■■□□□ 1.72
GFRA3-201ENST00000274721 BCORQ6W2J9 1755 aa25.77■■□□□ 1.72
GFRA3-201ENST00000274721 RASEFQ8IZ41 740 aa25.76■■□□□ 1.72
GFRA3-201ENST00000274721 KBTBD3Q8NAB2 608 aa25.76■■□□□ 1.72
GFRA3-201ENST00000274721 RIC1Q4ADV7 1423 aa25.76■■□□□ 1.71
GFRA3-201ENST00000274721 HCLS1P14317 486 aaPredicted RBP25.75■■□□□ 1.71
GFRA3-201ENST00000274721 NECTIN1Q15223 517 aa25.75■■□□□ 1.71
GFRA3-201ENST00000274721 SEPT12Q8IYM1 358 aa25.75■■□□□ 1.71
GFRA3-201ENST00000274721 VGLL2Q8N8G2 317 aa25.75■■□□□ 1.71
GFRA3-201ENST00000274721 XAGE2Q96GT9 111 aa25.75■■□□□ 1.71
GFRA3-201ENST00000274721 RPS6KA4O75676 772 aa25.74■■□□□ 1.71
GFRA3-201ENST00000274721 PAG1Q9NWQ8 432 aa25.74■■□□□ 1.71
GFRA3-201ENST00000274721 SBF2Q86WG5 1849 aa25.74■■□□□ 1.71
GFRA3-201ENST00000274721 HSP90B1P14625 803 aaKnown RBP25.73■■□□□ 1.71
GFRA3-201ENST00000274721 METTL24Q5JXM2 366 aa25.73■■□□□ 1.71
GFRA3-201ENST00000274721 DDX46Q7L014 1031 aaKnown RBP25.73■■□□□ 1.71
GFRA3-201ENST00000274721 IFIT1P09914 478 aaKnown RBP25.73■■□□□ 1.71
GFRA3-201ENST00000274721 ADORA1P30542 326 aa25.73■■□□□ 1.71
GFRA3-201ENST00000274721 UPF3BQ9BZI7 483 aaKnown RBP25.73■■□□□ 1.71
GFRA3-201ENST00000274721 CNNM1Q9NRU3 951 aa25.73■■□□□ 1.71
GFRA3-201ENST00000274721 FOXD4L1Q9NU39 408 aa25.73■■□□□ 1.71
GFRA3-201ENST00000274721 FAM177BA6PVY3 158 aa25.72■■□□□ 1.71
GFRA3-201ENST00000274721 CCDC158Q5M9N0 1113 aa25.72■■□□□ 1.71
GFRA3-201ENST00000274721 ZNF589Q86UQ0 364 aaPredicted RBP25.72■■□□□ 1.71
GFRA3-201ENST00000274721 CCNL1Q9UK58 526 aaPredicted RBP25.72■■□□□ 1.71
GFRA3-201ENST00000274721 LRP5O75197 1615 aa25.71■■□□□ 1.71
GFRA3-201ENST00000274721 RTL9Q8NET4 1388 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms