RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 ZBTB1Q9Y2K1 713 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 CDHR2Q9BYE9 1310 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 CSF1RP07333 972 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 CASTP20810 708 aaKnown RBP24.3■■□□□ 1.48
UBE2F-201ENST00000272930 AK2P54819 239 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 HLFQ16534 295 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 CREB3L3Q68CJ9 461 aa24.3■■□□□ 1.48
UBE2F-201ENST00000272930 GZF1Q9H116 711 aaPredicted RBP24.3■■□□□ 1.48
UBE2F-201ENST00000272930 ZKSCAN1P17029 563 aaPredicted RBP24.29■■□□□ 1.48
UBE2F-201ENST00000272930 DDB1Q16531 1140 aa24.29■■□□□ 1.48
UBE2F-201ENST00000272930 CCDC57Q2TAC2 916 aa24.29■■□□□ 1.48
UBE2F-201ENST00000272930 ADCK5Q3MIX3 580 aa24.29■■□□□ 1.48
UBE2F-201ENST00000272930 FAM89AQ96GI7 184 aa24.29■■□□□ 1.48
UBE2F-201ENST00000272930 CICQ96RK0 1608 aaPredicted RBP24.29■■□□□ 1.48
UBE2F-201ENST00000272930 FSD2A1L4K1 749 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 VPS53Q5VIR6 699 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 TICAM2Q86XR7 235 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 LIMCH1Q9UPQ0 1083 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 RPAP1Q9BWH6 1393 aaPredicted RBP24.28■■□□□ 1.48
UBE2F-201ENST00000272930 IL6STP40189 918 aaPredicted RBP24.28■■□□□ 1.48
UBE2F-201ENST00000272930 RUFY3Q7L099 469 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 ZNF589Q86UQ0 364 aaPredicted RBP24.28■■□□□ 1.48
UBE2F-201ENST00000272930 NLRP10Q86W26 655 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 JAKMIP1Q96N16 626 aaKnown RBP24.28■■□□□ 1.48
UBE2F-201ENST00000272930 SLIT2O94813 1529 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 SPATA31A5Q5VU36 1347 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 SPATA31A7Q8IWB4 1347 aa24.28■■□□□ 1.48
UBE2F-201ENST00000272930 BRD1O95696 1058 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 TIMM10P62072 90 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 NEUROD6Q96NK8 337 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 DNAJC2Q99543 621 aaKnown RBP24.27■■□□□ 1.48
UBE2F-201ENST00000272930 PUS3Q9BZE2 481 aaKnown RBP24.27■■□□□ 1.48
UBE2F-201ENST00000272930 RREB1Q92766 1687 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 PALLDQ8WX93 1383 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 SLC27A2O14975 620 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 L1TD1Q5T7N2 865 aaKnown RBP24.27■■□□□ 1.48
UBE2F-201ENST00000272930 KBTBD3Q8NAB2 608 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 NDUFB9Q9Y6M9 179 aa24.27■■□□□ 1.48
UBE2F-201ENST00000272930 ERVV-1B6SEH8 477 aa24.26■■□□□ 1.47
UBE2F-201ENST00000272930 TAF5LO75529 589 aa24.26■■□□□ 1.47
UBE2F-201ENST00000272930 KCNJ4P48050 445 aa24.26■■□□□ 1.47
UBE2F-201ENST00000272930 CYP46A1Q9Y6A2 500 aa24.26■■□□□ 1.47
UBE2F-201ENST00000272930 A0A1B0GUL7 405 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 MCTP1Q6DN14 999 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 ARXQ96QS3 562 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 CPA1P15085 419 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 RNF20Q5VTR2 975 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 USPL1Q5W0Q7 1092 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 PDRG1Q9NUG6 133 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 CEP126Q9P2H0 1117 aa24.25■■□□□ 1.47
UBE2F-201ENST00000272930 TSGA10IPQ3SY00 556 aa24.24■■□□□ 1.47
UBE2F-201ENST00000272930 BARGINQ6ZT62 677 aa24.24■■□□□ 1.47
UBE2F-201ENST00000272930 DDX46Q7L014 1031 aaKnown RBP24.24■■□□□ 1.47
UBE2F-201ENST00000272930 HMG20BQ9P0W2 317 aa24.24■■□□□ 1.47
UBE2F-201ENST00000272930 GPTP24298 496 aa24.23■■□□□ 1.47
UBE2F-201ENST00000272930 KLHL40Q2TBA0 621 aa24.23■■□□□ 1.47
UBE2F-201ENST00000272930 MARCH10Q8NA82 808 aaPredicted RBP24.23■■□□□ 1.47
UBE2F-201ENST00000272930 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.23■■□□□ 1.47
UBE2F-201ENST00000272930 SH3TC1Q8TE82 1336 aa24.23■■□□□ 1.47
UBE2F-201ENST00000272930 GOLGA6L3A6NEY3 463 aa24.23■■□□□ 1.47
UBE2F-201ENST00000272930 IFIT5Q13325 482 aaKnown RBP24.23■■□□□ 1.47
UBE2F-201ENST00000272930 LMBRD1Q9NUN5 540 aa24.23■■□□□ 1.47
UBE2F-201ENST00000272930 PAG1Q9NWQ8 432 aa24.23■■□□□ 1.47
UBE2F-201ENST00000272930 PSMA5P28066 241 aa24.22■■□□□ 1.47
UBE2F-201ENST00000272930 DZIP3Q86Y13 1208 aaKnown RBP24.22■■□□□ 1.47
UBE2F-201ENST00000272930 MCMDC2Q4G0Z9 681 aa24.22■■□□□ 1.47
UBE2F-201ENST00000272930 ISY1Q9ULR0 285 aaKnown RBP24.22■■□□□ 1.47
UBE2F-201ENST00000272930 AKAP2Q9Y2D5 859 aa24.22■■□□□ 1.47
UBE2F-201ENST00000272930 TOM1O60784 492 aa24.21■■□□□ 1.47
UBE2F-201ENST00000272930 SYNE4Q8N205 404 aa24.21■■□□□ 1.47
UBE2F-201ENST00000272930 TTLL11Q8NHH1 800 aa24.21■■□□□ 1.47
UBE2F-201ENST00000272930 ZSCAN31Q96LW9 406 aaPredicted RBP24.21■■□□□ 1.47
UBE2F-201ENST00000272930 MYH14Q7Z406 1995 aaKnown RBP24.21■■□□□ 1.47
UBE2F-201ENST00000272930 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.47
UBE2F-201ENST00000272930 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.47
UBE2F-201ENST00000272930 EIF5P55010 431 aaKnown RBP24.2■■□□□ 1.47
UBE2F-201ENST00000272930 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.47
UBE2F-201ENST00000272930 SH2B1Q9NRF2 756 aaPredicted RBP24.2■■□□□ 1.47
UBE2F-201ENST00000272930 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.2■■□□□ 1.47
UBE2F-201ENST00000272930 GOLIM4O00461 696 aa24.2■■□□□ 1.46
UBE2F-201ENST00000272930 ZNF34Q8IZ26 560 aa24.2■■□□□ 1.46
UBE2F-201ENST00000272930 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.46
UBE2F-201ENST00000272930 DDX49Q9Y6V7 483 aaKnown RBP24.2■■□□□ 1.46
UBE2F-201ENST00000272930 RIC1Q4ADV7 1423 aa24.2■■□□□ 1.46
UBE2F-201ENST00000272930 CHGBP05060 677 aa24.19■■□□□ 1.46
UBE2F-201ENST00000272930 IFIT1P09914 478 aaKnown RBP24.19■■□□□ 1.46
UBE2F-201ENST00000272930 CTSWP56202 376 aa24.19■■□□□ 1.46
UBE2F-201ENST00000272930 TAF7LQ5H9L4 462 aa24.19■■□□□ 1.46
UBE2F-201ENST00000272930 INTS5Q6P9B9 1019 aaKnown RBP24.19■■□□□ 1.46
UBE2F-201ENST00000272930 ALDH8A1Q9H2A2 487 aaPredicted RBP24.19■■□□□ 1.46
UBE2F-201ENST00000272930 TBC1D2BQ9UPU7 963 aa24.19■■□□□ 1.46
UBE2F-201ENST00000272930 LARGE1O95461 756 aa24.18■■□□□ 1.46
UBE2F-201ENST00000272930 CCDC85AQ96PX6 553 aaPredicted RBP24.18■■□□□ 1.46
UBE2F-201ENST00000272930 SEC62Q99442 399 aaKnown RBP24.18■■□□□ 1.46
UBE2F-201ENST00000272930 UBN2Q6ZU65 1347 aa24.18■■□□□ 1.46
UBE2F-201ENST00000272930 IRS4O14654 1257 aaPredicted RBP24.18■■□□□ 1.46
UBE2F-201ENST00000272930 LARP6Q9BRS8 491 aaKnown RBP24.18■■□□□ 1.46
UBE2F-201ENST00000272930 HELLSQ9NRZ9 838 aa24.18■■□□□ 1.46
UBE2F-201ENST00000272930 CCDC87Q9NVE4 849 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms