RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 MED23Q9ULK4 1368 aa26.31■■□□□ 1.8
CDR2-201ENST00000268383 TFCP2Q12800 502 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 GCKRQ14397 625 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 ZNF790Q6PG37 636 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 HIP1O00291 1037 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 TYRO3Q06418 890 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 SPATA32Q96LK8 384 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 ATP5J2-PTCD1G3V325 749 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 PTCD1O75127 700 aaKnown RBP26.3■■□□□ 1.8
CDR2-201ENST00000268383 MAP3K11Q16584 847 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 RNF20Q5VTR2 975 aa26.3■■□□□ 1.8
CDR2-201ENST00000268383 CEBPZQ03701 1054 aaKnown RBP26.29■■□□□ 1.8
CDR2-201ENST00000268383 USP16Q9Y5T5 823 aa26.29■■□□□ 1.8
CDR2-201ENST00000268383 GOLGA6L4A6NEF3 574 aa26.28■■□□□ 1.8
CDR2-201ENST00000268383 NEXNQ0ZGT2 675 aa26.28■■□□□ 1.8
CDR2-201ENST00000268383 ANO6Q4KMQ2 910 aa26.28■■□□□ 1.8
CDR2-201ENST00000268383 ZNF496Q96IT1 587 aaPredicted RBP26.28■■□□□ 1.8
CDR2-201ENST00000268383 TNMDQ9H2S6 317 aa26.28■■□□□ 1.8
CDR2-201ENST00000268383 HDAC5Q9UQL6 1122 aa26.28■■□□□ 1.8
CDR2-201ENST00000268383 DDX46Q7L014 1031 aaKnown RBP26.27■■□□□ 1.8
CDR2-201ENST00000268383 UBE3BQ7Z3V4 1068 aa26.27■■□□□ 1.8
CDR2-201ENST00000268383 LEO1Q8WVC0 666 aaPredicted RBP26.27■■□□□ 1.8
CDR2-201ENST00000268383 NR1I2O75469 434 aa26.27■■□□□ 1.8
CDR2-201ENST00000268383 PTGS1P23219 599 aa26.27■■□□□ 1.8
CDR2-201ENST00000268383 PGBD1Q96JS3 809 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 DBNDD2Q9BQY9 259 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 ANKLE2Q86XL3 938 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 ZNF710Q8N1W2 664 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 FAM200AQ8TCP9 573 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 SNRKQ9NRH2 765 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 NLRP2Q9NX02 1062 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 NRBP1Q9UHY1 535 aa26.26■■□□□ 1.79
CDR2-201ENST00000268383 HSP90B1P14625 803 aaKnown RBP26.25■■□□□ 1.79
CDR2-201ENST00000268383 Q6ZUG5 572 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 KIAA1524Q8TCG1 905 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 PDCP20941 246 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 BRF1Q92994 677 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 RGPD5Q99666 1765 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 CBX8Q9HC52 389 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 SPTLC3Q9NUV7 552 aa26.25■■□□□ 1.79
CDR2-201ENST00000268383 PTPN12Q05209 780 aaKnown RBP26.24■■□□□ 1.79
CDR2-201ENST00000268383 TNNI3KQ59H18 835 aa26.24■■□□□ 1.79
CDR2-201ENST00000268383 FPGT-TNNI3KV9GXZ4 949 aa26.24■■□□□ 1.79
CDR2-201ENST00000268383 LRMPQ12912 555 aa26.24■■□□□ 1.79
CDR2-201ENST00000268383 ANKRD1Q15327 319 aa26.24■■□□□ 1.79
CDR2-201ENST00000268383 CHD2O14647 1828 aaKnown RBP26.24■■□□□ 1.79
CDR2-201ENST00000268383 NCAPD2Q15021 1401 aa26.24■■□□□ 1.79
CDR2-201ENST00000268383 A0A0G2JLW4 131 aa26.23■■□□□ 1.79
CDR2-201ENST00000268383 BICD2Q8TD16 824 aa26.23■■□□□ 1.79
CDR2-201ENST00000268383 METTL22Q9BUU2 404 aaPredicted RBP26.23■■□□□ 1.79
CDR2-201ENST00000268383 FTOQ9C0B1 505 aaKnown RBP eCLIP26.23■■□□□ 1.796e-7■■■□□ 15
CDR2-201ENST00000268383 CYP21A2P08686 494 aa26.23■■□□□ 1.79
CDR2-201ENST00000268383 DDX17Q92841 729 aaKnown RBP26.23■■□□□ 1.79
CDR2-201ENST00000268383 NEK1Q96PY6 1258 aa26.23■■□□□ 1.79
CDR2-201ENST00000268383 ANKRD13DQ6ZTN6 518 aa26.23■■□□□ 1.79
CDR2-201ENST00000268383 ZNF609O15014 1411 aa26.22■■□□□ 1.79
CDR2-201ENST00000268383 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
CDR2-201ENST00000268383 A0A087WWV3 80 aa26.22■■□□□ 1.79
CDR2-201ENST00000268383 RFX5P48382 616 aaPredicted RBP26.22■■□□□ 1.79
CDR2-201ENST00000268383 SLC52A2Q9HAB3 445 aa26.22■■□□□ 1.79
CDR2-201ENST00000268383 ELP1O95163 1332 aa26.22■■□□□ 1.79
CDR2-201ENST00000268383 MAP7D2Q96T17 732 aa26.22■■□□□ 1.79
CDR2-201ENST00000268383 C5P01031 1676 aa26.21■■□□□ 1.79
CDR2-201ENST00000268383 GTF3C6Q969F1 213 aa26.21■■□□□ 1.79
CDR2-201ENST00000268383 DNAJC25Q9H1X3 360 aa26.21■■□□□ 1.79
CDR2-201ENST00000268383 SCAND2PQ9GZW5 306 aaPredicted RBP26.21■■□□□ 1.79
CDR2-201ENST00000268383 STOX1Q6ZVD7 989 aa26.2■■□□□ 1.79
CDR2-201ENST00000268383 CCDC186Q7Z3E2 898 aa26.2■■□□□ 1.79
CDR2-201ENST00000268383 KRT28Q7Z3Y7 464 aa26.2■■□□□ 1.79
CDR2-201ENST00000268383 DRC7Q8IY82 874 aa26.2■■□□□ 1.79
CDR2-201ENST00000268383 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.79
CDR2-201ENST00000268383 ERBB3P21860 1342 aa26.2■■□□□ 1.78
CDR2-201ENST00000268383 KDM6AO15550 1401 aaPredicted RBP26.2■■□□□ 1.78
CDR2-201ENST00000268383 PRIMPOLQ96LW4 560 aa26.2■■□□□ 1.78
CDR2-201ENST00000268383 ATP5JP18859 108 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 PRDM10Q9NQV6 1147 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 SIPA1L3O60292 1781 aaPredicted RBP26.19■■□□□ 1.78
CDR2-201ENST00000268383 NPHP3Q7Z494 1330 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 H3BQV1 296 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 SCRN1Q12765 414 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 IFFO2Q5TF58 517 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 HMG20BQ9P0W2 317 aa26.19■■□□□ 1.78
CDR2-201ENST00000268383 A0A087WZG4 1122 aa26.18■■□□□ 1.78
CDR2-201ENST00000268383 FGD1P98174 961 aa26.18■■□□□ 1.78
CDR2-201ENST00000268383 COPRSQ9NQ92 184 aa26.18■■□□□ 1.78
CDR2-201ENST00000268383 RESTQ13127 1097 aa26.18■■□□□ 1.78
CDR2-201ENST00000268383 USPL1Q5W0Q7 1092 aa26.18■■□□□ 1.78
CDR2-201ENST00000268383 TRIM5Q9C035 493 aa26.18■■□□□ 1.78
CDR2-201ENST00000268383 CHST3Q7LGC8 479 aa26.17■■□□□ 1.78
CDR2-201ENST00000268383 CLSTN2Q9H4D0 955 aa26.17■■□□□ 1.78
CDR2-201ENST00000268383 NAP1L2Q9ULW6 460 aaPredicted RBP26.17■■□□□ 1.78
CDR2-201ENST00000268383 HMGN5P82970 282 aaKnown RBP26.17■■□□□ 1.78
CDR2-201ENST00000268383 LRP10Q7Z4F1 713 aa26.17■■□□□ 1.78
CDR2-201ENST00000268383 JCADQ9P266 1359 aa26.17■■□□□ 1.78
CDR2-201ENST00000268383 CCT2P78371 535 aaKnown RBP26.16■■□□□ 1.78
CDR2-201ENST00000268383 TSGA10IPQ3SY00 556 aa26.16■■□□□ 1.78
CDR2-201ENST00000268383 NEUROD6Q96NK8 337 aa26.16■■□□□ 1.78
CDR2-201ENST00000268383 BCL11BQ9C0K0 894 aaPredicted RBP26.16■■□□□ 1.78
CDR2-201ENST00000268383 RIOK3O14730 519 aaKnown RBP26.16■■□□□ 1.78
CDR2-201ENST00000268383 PHKG2P15735 406 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms