RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 HMGB1P09429 215 aaKnown RBP19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 ZSCAN22P10073 491 aaPredicted RBP19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 CAPN2P17655 700 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 KAT14Q9H8E8 782 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 MRVI1Q9Y6F6 885 aa19.22■□□□□ 0.67
TSPAN3-201ENST00000267970 PLS1Q14651 629 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 SYT1P21579 422 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 DACT1Q9NYF0 836 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 POTEB2H3BUK9 544 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 RXRAP19793 462 aa19.21■□□□□ 0.67
TSPAN3-201ENST00000267970 ANKRD18BA2A2Z9 1011 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 DHX58Q96C10 678 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 FLIIQ13045 1269 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 CCDC25Q86WR0 208 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 ZNF287Q9HBT7 754 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 PAXBP1Q9Y5B6 917 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 UBE3BQ7Z3V4 1068 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 CTAGE15A4D2H0 777 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 CTAGE8P0CG41 777 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 CTAGE6Q86UF2 777 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 CTAGE4Q8IX94 777 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 OTUD6BQ8N6M0 293 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 SDSP20132 328 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 SYNCQ9H7C4 482 aa19.2■□□□□ 0.66
TSPAN3-201ENST00000267970 HEATR3Q7Z4Q2 680 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 DAAM2Q86T65 1068 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 ARFGAP3Q9NP61 516 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 GUCA1BQ9UMX6 200 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 NEMFO60524 1076 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 STAT6P42226 847 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 GSTA5Q7RTV2 222 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 MRRFQ96E11 262 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 KIF4AO95239 1232 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 SYT10Q6XYQ8 523 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 STX8Q9UNK0 236 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 C9orf84Q5VXU9 1444 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 TLDC2A0PJX2 215 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 PSMC4P43686 418 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 Q6ZUG5 572 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 FAM212AQ96EL1 285 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 FERP16591 822 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 FEZ1Q99689 392 aa19.19■□□□□ 0.66
TSPAN3-201ENST00000267970 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 DCAF8L1A6NGE4 600 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 C6orf163Q5TEZ5 329 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 ALG1Q9BT22 464 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 RNASE9P60153 205 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 KLHL40Q2TBA0 621 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 CCDC155Q8N6L0 562 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 ECHDC1Q9NTX5 307 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 LDHAL6AQ6ZMR3 332 aa19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 RPGRQ92834 1020 aaKnown RBP19.18■□□□□ 0.66
TSPAN3-201ENST00000267970 PI4KAP2A4QPH2 592 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 PI4KAP1Q8N8J0 262 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 PPP1R9BQ96SB3 815 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 AMPD3Q01432 767 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 EEF2P13639 858 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 CCDC50Q8IVM0 306 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 MBIPQ9NS73 344 aa19.17■□□□□ 0.66
TSPAN3-201ENST00000267970 ALDH1L2Q3SY69 923 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 CETN1Q12798 172 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 NAA25Q14CX7 972 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 NCOA7Q8NI08 942 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 TSNARE1Q96NA8 513 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 ZNF569Q5MCW4 686 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 C17orf53Q8N3J3 647 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 KCNK9Q9NPC2 374 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 VGLL3A8MV65 326 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 GRIPAP1Q4V328 841 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 SPAG5Q96R06 1193 aa19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 U2AF2P26368 475 aaKnown RBP eCLIP19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 CKAP4Q07065 602 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 NAP1L3Q99457 506 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-201ENST00000267970 ZGPATQ8N5A5 531 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 JAG2Q9Y219 1238 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 PICALMQ13492 652 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 ZBTB21Q9ULJ3 1066 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 ZBTB16Q05516 673 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 PRIMPOLQ96LW4 560 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 MEIS3Q99687 375 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 CCDC171Q6TFL3 1326 aa19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 LRPPRCP42704 1394 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 MRPS9P82933 396 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 IQCGQ9H095 443 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 RNF41Q9H4P4 317 aaPredicted RBP19.15■□□□□ 0.66
TSPAN3-201ENST00000267970 CFAP58Q5T655 872 aa19.14■□□□□ 0.66
TSPAN3-201ENST00000267970 IRX5P78411 483 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-201ENST00000267970 TTF1Q15361 905 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-201ENST00000267970 TMEM87AQ8NBN3 555 aa19.14■□□□□ 0.65
TSPAN3-201ENST00000267970 PRG4Q92954 1404 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-201ENST00000267970 TBCAO75347 108 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-201ENST00000267970 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-201ENST00000267970 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms