RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 FAM161AQ3B820 660 aa28.06■■■□□ 2.08
UFD1-201ENST00000263202 KIF1BPQ96EK5 621 aa28.06■■■□□ 2.08
UFD1-201ENST00000263202 G3BP1Q13283 466 aaKnown RBP eCLIP28.05■■■□□ 2.08
UFD1-201ENST00000263202 OS9Q13438 667 aaPredicted RBP28.05■■■□□ 2.08
UFD1-201ENST00000263202 SLC15A2Q16348 729 aa28.05■■■□□ 2.08
UFD1-201ENST00000263202 NBPF5PQ86XG9 351 aaPredicted RBP28.05■■■□□ 2.08
UFD1-201ENST00000263202 C16orf71Q8IYS4 520 aaPredicted RBP28.05■■■□□ 2.08
UFD1-201ENST00000263202 SIL1Q9H173 461 aa28.05■■■□□ 2.08
UFD1-201ENST00000263202 ERC1Q8IUD2 1116 aa28.04■■■□□ 2.08
UFD1-201ENST00000263202 CCDC85AQ96PX6 553 aaPredicted RBP28.04■■■□□ 2.08
UFD1-201ENST00000263202 CCDC57Q2TAC2 916 aa28.04■■■□□ 2.08
UFD1-201ENST00000263202 STK32BQ9NY57 414 aa28.04■■■□□ 2.08
UFD1-201ENST00000263202 TM4SF1P30408 202 aa28.03■■■□□ 2.08
UFD1-201ENST00000263202 TPTE2Q6XPS3 522 aa28.03■■■□□ 2.08
UFD1-201ENST00000263202 BCL11AQ9H165 835 aa28.03■■■□□ 2.08
UFD1-201ENST00000263202 GREM2Q9H772 168 aa28.03■■■□□ 2.08
UFD1-201ENST00000263202 MSH5O43196 834 aa28.02■■■□□ 2.08
UFD1-201ENST00000263202 GTF2E1P29083 439 aaPredicted RBP28.02■■■□□ 2.08
UFD1-201ENST00000263202 SLC10A5Q5PT55 438 aa28.02■■■□□ 2.08
UFD1-201ENST00000263202 ABCC12Q96J65 1359 aa28.02■■■□□ 2.08
UFD1-201ENST00000263202 SASH1O94885 1247 aa28.02■■■□□ 2.08
UFD1-201ENST00000263202 IFIT5Q13325 482 aaKnown RBP28.02■■■□□ 2.08
UFD1-201ENST00000263202 IL1RAPL2Q9NP60 686 aa28.02■■■□□ 2.08
UFD1-201ENST00000263202 ZNF594Q96JF6 807 aaPredicted RBP28.01■■■□□ 2.07
UFD1-201ENST00000263202 ITGA6P23229 1130 aa28■■■□□ 2.07
UFD1-201ENST00000263202 PLEKHM2Q8IWE5 1019 aa28■■■□□ 2.07
UFD1-201ENST00000263202 OTUD7AQ8TE49 926 aaPredicted RBP28■■■□□ 2.07
UFD1-201ENST00000263202 ANKRD18BA2A2Z9 1011 aa27.98■■■□□ 2.07
UFD1-201ENST00000263202 NLGN1Q8N2Q7 840 aa27.98■■■□□ 2.07
UFD1-201ENST00000263202 RTL9Q8NET4 1388 aa27.98■■■□□ 2.07
UFD1-201ENST00000263202 CCDC152Q4G0S7 254 aa27.97■■■□□ 2.07
UFD1-201ENST00000263202 ATG9AQ7Z3C6 839 aa27.97■■■□□ 2.07
UFD1-201ENST00000263202 SALL3Q9BXA9 1300 aa27.97■■■□□ 2.07
UFD1-201ENST00000263202 TNRC6CQ9HCJ0 1690 aaKnown RBP27.97■■■□□ 2.07
UFD1-201ENST00000263202 CIAO1O76071 339 aa27.97■■■□□ 2.07
UFD1-201ENST00000263202 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.97■■■□□ 2.07
UFD1-201ENST00000263202 EYA2O00167 538 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 DDR1Q08345 913 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 TAF7LQ5H9L4 462 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 C3orf67Q6ZVT6 689 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 FBXO3Q9UK99 471 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 SPEF2Q9C093 1822 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 LRP5O75197 1615 aa27.96■■■□□ 2.07
UFD1-201ENST00000263202 POLRMTO00411 1230 aaKnown RBP27.95■■■□□ 2.07
UFD1-201ENST00000263202 SERPINB2P05120 415 aa27.95■■■□□ 2.07
UFD1-201ENST00000263202 SF3B3Q15393 1217 aaKnown RBP27.95■■■□□ 2.07
UFD1-201ENST00000263202 LRRC24Q50LG9 513 aa27.95■■■□□ 2.07
UFD1-201ENST00000263202 CCDC24Q8N4L8 307 aa27.95■■■□□ 2.07
UFD1-201ENST00000263202 CNBD1Q8NA66 436 aa27.95■■■□□ 2.07
UFD1-201ENST00000263202 PUS3Q9BZE2 481 aaKnown RBP27.95■■■□□ 2.07
UFD1-201ENST00000263202 NRXN2Q9P2S2 1712 aa27.95■■■□□ 2.07
UFD1-201ENST00000263202 CLASRPQ8N2M8 674 aaKnown RBP27.95■■■□□ 2.06
UFD1-201ENST00000263202 NPHP1O15259 732 aa27.94■■■□□ 2.06
UFD1-201ENST00000263202 IL15P40933 162 aaPredicted RBP27.94■■■□□ 2.06
UFD1-201ENST00000263202 PRR5LQ6MZQ0 368 aa27.94■■■□□ 2.06
UFD1-201ENST00000263202 TFCP2Q12800 502 aa27.93■■■□□ 2.06
UFD1-201ENST00000263202 TAF1P21675 1872 aa27.93■■■□□ 2.06
UFD1-201ENST00000263202 RIC1Q4ADV7 1423 aa27.93■■■□□ 2.06
UFD1-201ENST00000263202 NLRP3Q96P20 1036 aa27.92■■■□□ 2.06
UFD1-201ENST00000263202 SEC31BQ9NQW1 1179 aa27.92■■■□□ 2.06
UFD1-201ENST00000263202 PDE1AP54750 535 aa27.92■■■□□ 2.06
UFD1-201ENST00000263202 OSBPL3Q9H4L5 887 aa27.92■■■□□ 2.06
UFD1-201ENST00000263202 MX1P20591 662 aa27.91■■■□□ 2.06
UFD1-201ENST00000263202 COL4A1P02462 1669 aa27.91■■■□□ 2.06
UFD1-201ENST00000263202 LDHAL6AQ6ZMR3 332 aa27.9■■■□□ 2.06
UFD1-201ENST00000263202 UPF1Q92900 1129 aaKnown RBP eCLIP27.9■■■□□ 2.06
UFD1-201ENST00000263202 EAF2Q96CJ1 260 aaPredicted RBP27.9■■■□□ 2.06
UFD1-201ENST00000263202 STAP2Q9UGK3 403 aa27.9■■■□□ 2.06
UFD1-201ENST00000263202 AACSQ86V21 672 aa27.89■■■□□ 2.06
UFD1-201ENST00000263202 RIPOR2Q9Y4F9 1068 aa27.89■■■□□ 2.06
UFD1-201ENST00000263202 ST5P78524 1137 aa27.88■■■□□ 2.05
UFD1-201ENST00000263202 MSL1Q68DK7 614 aa27.88■■■□□ 2.05
UFD1-201ENST00000263202 BMP2KLQ5H9B9 411 aa27.88■■■□□ 2.05
UFD1-201ENST00000263202 TTC22Q5TAA0 569 aa27.88■■■□□ 2.05
UFD1-201ENST00000263202 ANKRD31Q8N7Z5 1873 aa27.87■■■□□ 2.05
UFD1-201ENST00000263202 IFIT2P09913 472 aaKnown RBP27.87■■■□□ 2.05
UFD1-201ENST00000263202 TNNI3KQ59H18 835 aa27.87■■■□□ 2.05
UFD1-201ENST00000263202 CNNM1Q9NRU3 951 aa27.87■■■□□ 2.05
UFD1-201ENST00000263202 FPGT-TNNI3KV9GXZ4 949 aa27.87■■■□□ 2.05
UFD1-201ENST00000263202 MMP10P09238 476 aa27.86■■■□□ 2.05
UFD1-201ENST00000263202 CDC5LQ99459 802 aaKnown RBP27.86■■■□□ 2.05
UFD1-201ENST00000263202 GPR108Q9NPR9 543 aa27.86■■■□□ 2.05
UFD1-201ENST00000263202 GSPT1P15170 499 aaKnown RBP27.85■■■□□ 2.05
UFD1-201ENST00000263202 TSHZ3Q63HK5 1081 aa27.85■■■□□ 2.05
UFD1-201ENST00000263202 CEP126Q9P2H0 1117 aa27.85■■■□□ 2.05
UFD1-201ENST00000263202 AOX1Q06278 1338 aa27.85■■■□□ 2.05
UFD1-201ENST00000263202 CCDC8Q9H0W5 538 aaPredicted RBP27.85■■■□□ 2.05
UFD1-201ENST00000263202 PARP3Q9Y6F1 533 aa27.85■■■□□ 2.05
UFD1-201ENST00000263202 IGHMBP2P38935 993 aaKnown RBP27.84■■■□□ 2.05
UFD1-201ENST00000263202 C8orf34Q49A92 452 aa27.84■■■□□ 2.05
UFD1-201ENST00000263202 MPHOSPH8Q99549 860 aa27.84■■■□□ 2.05
UFD1-201ENST00000263202 PDGFDQ9GZP0 370 aaPredicted RBP27.84■■■□□ 2.05
UFD1-201ENST00000263202 A0A1B0GUL6 1792 aa27.84■■■□□ 2.05
UFD1-201ENST00000263202 ZNF609O15014 1411 aa27.84■■■□□ 2.05
UFD1-201ENST00000263202 TLR7Q9NYK1 1049 aaKnown RBP27.83■■■□□ 2.05
UFD1-201ENST00000263202 TTC41PQ6P2S7 1318 aa27.83■■■□□ 2.04
UFD1-201ENST00000263202 METTL24Q5JXM2 366 aa27.82■■■□□ 2.04
UFD1-201ENST00000263202 ANKRD18AQ8IVF6 992 aa27.82■■■□□ 2.04
UFD1-201ENST00000263202 PI4K2BQ8TCG2 481 aa27.81■■■□□ 2.04
UFD1-201ENST00000263202 BACH2Q9BYV9 841 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms