RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 GNAI3P08754 354 aa15.05■□□□□ 0
NIP7-201ENST00000254940 CHRNA5P30532 468 aa15.05■□□□□ 0
NIP7-201ENST00000254940 FOXO4P98177 505 aa15.05■□□□□ 0
NIP7-201ENST00000254940 LNPKQ9C0E8 428 aa15.05■□□□□ 0
NIP7-201ENST00000254940 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ 0
NIP7-201ENST00000254940 COL4A1P02462 1669 aa15.05■□□□□ 0
NIP7-201ENST00000254940 DDX60Q8IY21 1712 aaKnown RBP15.05■□□□□ -0
NIP7-201ENST00000254940 MTFR1LQ9H019 292 aa15.05■□□□□ -0
NIP7-201ENST00000254940 GREM2Q9H772 168 aa15.05■□□□□ -0
NIP7-201ENST00000254940 COL24A1Q17RW2 1714 aa15.05■□□□□ -0
NIP7-201ENST00000254940 SRGAP3O43295 1099 aa15.04■□□□□ -0
NIP7-201ENST00000254940 C16orf71Q8IYS4 520 aaPredicted RBP15.04■□□□□ -0
NIP7-201ENST00000254940 HDAC1Q13547 482 aaPredicted RBP15.04■□□□□ -0
NIP7-201ENST00000254940 CEP85Q6P2H3 762 aa15.04■□□□□ -0
NIP7-201ENST00000254940 SMARCA5O60264 1052 aaPredicted RBP15.03■□□□□ -0
NIP7-201ENST00000254940 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
NIP7-201ENST00000254940 LAMB2P55268 1798 aa15.03■□□□□ -0
NIP7-201ENST00000254940 ST5P78524 1137 aa15.03■□□□□ -0
NIP7-201ENST00000254940 OTUD7AQ8TE49 926 aaPredicted RBP15.03■□□□□ -0
NIP7-201ENST00000254940 NYXQ9GZU5 481 aa15.03■□□□□ -0
NIP7-201ENST00000254940 SPEF2Q9C093 1822 aa15.02■□□□□ -0
NIP7-201ENST00000254940 ANKRD31Q8N7Z5 1873 aa15.02■□□□□ -0
NIP7-201ENST00000254940 PTGER2P43116 358 aa15.02■□□□□ -0
NIP7-201ENST00000254940 CTSWP56202 376 aa15.02■□□□□ -0
NIP7-201ENST00000254940 AAMPQ13685 434 aa15.02■□□□□ -0
NIP7-201ENST00000254940 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
NIP7-201ENST00000254940 A0A0G2JLW4 131 aa15.02□□□□□ -0.01
NIP7-201ENST00000254940 UTYO14607 1347 aa15.02□□□□□ -0.01
NIP7-201ENST00000254940 PDE8AO60658 829 aa15.02□□□□□ -0.01
NIP7-201ENST00000254940 MYH3P11055 1940 aa15.02□□□□□ -0.01
NIP7-201ENST00000254940 POLD1P28340 1107 aa15.02□□□□□ -0.01
NIP7-201ENST00000254940 EXOC6BQ9Y2D4 811 aa15.02□□□□□ -0.01
NIP7-201ENST00000254940 CACNA1SQ13698 1873 aa15.01□□□□□ -0.01
NIP7-201ENST00000254940 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
NIP7-201ENST00000254940 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
NIP7-201ENST00000254940 OLFM4Q6UX06 510 aa15.01□□□□□ -0.01
NIP7-201ENST00000254940 SLC16A10Q8TF71 515 aa15.01□□□□□ -0.01
NIP7-201ENST00000254940 ZNF622Q969S3 477 aaKnown RBP eCLIP15.01□□□□□ -0.01
NIP7-201ENST00000254940 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
NIP7-201ENST00000254940 PUS3Q9BZE2 481 aaKnown RBP15.01□□□□□ -0.01
NIP7-201ENST00000254940 ITGA6P23229 1130 aa15□□□□□ -0.01
NIP7-201ENST00000254940 SMC5Q8IY18 1101 aa15□□□□□ -0.01
NIP7-201ENST00000254940 SLC4A3P48751 1232 aa15□□□□□ -0.01
NIP7-201ENST00000254940 CELF1Q92879 486 aaKnown RBP15□□□□□ -0.01
NIP7-201ENST00000254940 CDHR2Q9BYE9 1310 aa14.99□□□□□ -0.01
NIP7-201ENST00000254940 C2CD5Q86YS7 1000 aa14.99□□□□□ -0.01
NIP7-201ENST00000254940 SPON1Q9HCB6 807 aa14.99□□□□□ -0.01
NIP7-201ENST00000254940 WTIPA6NIX2 430 aaPredicted RBP14.98□□□□□ -0.01
NIP7-201ENST00000254940 ATP8B2P98198 1209 aa14.98□□□□□ -0.01
NIP7-201ENST00000254940 TAF7LQ5H9L4 462 aa14.98□□□□□ -0.01
NIP7-201ENST00000254940 NLGN2Q8NFZ4 835 aa14.98□□□□□ -0.01
NIP7-201ENST00000254940 HELBQ8NG08 1087 aaPredicted RBP14.98□□□□□ -0.01
NIP7-201ENST00000254940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.98□□□□□ -0.01
NIP7-201ENST00000254940 SNAP23O00161 211 aa14.98□□□□□ -0.01
NIP7-201ENST00000254940 LRRC24Q50LG9 513 aa14.98□□□□□ -0.01
NIP7-201ENST00000254940 IPO9Q96P70 1041 aaKnown RBP14.98□□□□□ -0.01
NIP7-201ENST00000254940 SGIP1Q9BQI5 828 aa14.98□□□□□ -0.01
NIP7-201ENST00000254940 COL11A2P13942 1736 aaPredicted RBP14.98□□□□□ -0.01
NIP7-201ENST00000254940 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
NIP7-201ENST00000254940 CCDC57Q2TAC2 916 aa14.97□□□□□ -0.01
NIP7-201ENST00000254940 TSHZ3Q63HK5 1081 aa14.97□□□□□ -0.01
NIP7-201ENST00000254940 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
NIP7-201ENST00000254940 DPEP1P16444 411 aa14.97□□□□□ -0.01
NIP7-201ENST00000254940 IFIT5Q13325 482 aaKnown RBP14.97□□□□□ -0.01
NIP7-201ENST00000254940 NUCB1Q02818 461 aa14.96□□□□□ -0.01
NIP7-201ENST00000254940 OS9Q13438 667 aaPredicted RBP14.96□□□□□ -0.01
NIP7-201ENST00000254940 CCDC152Q4G0S7 254 aa14.96□□□□□ -0.01
NIP7-201ENST00000254940 SLC10A5Q5PT55 438 aa14.96□□□□□ -0.01
NIP7-201ENST00000254940 CHD1LQ86WJ1 897 aa14.96□□□□□ -0.01
NIP7-201ENST00000254940 BRIP1Q9BX63 1249 aa14.96□□□□□ -0.01
NIP7-201ENST00000254940 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
NIP7-201ENST00000254940 CSF1RP07333 972 aa14.95□□□□□ -0.02
NIP7-201ENST00000254940 RFX5P48382 616 aaPredicted RBP14.95□□□□□ -0.02
NIP7-201ENST00000254940 RABL6Q3YEC7 729 aaPredicted RBP14.95□□□□□ -0.02
NIP7-201ENST00000254940 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
NIP7-201ENST00000254940 ANKRD18BA2A2Z9 1011 aa14.95□□□□□ -0.02
NIP7-201ENST00000254940 PTPN12Q05209 780 aaKnown RBP14.95□□□□□ -0.02
NIP7-201ENST00000254940 DDX46Q7L014 1031 aaKnown RBP14.95□□□□□ -0.02
NIP7-201ENST00000254940 IL1RAPL2Q9NP60 686 aa14.95□□□□□ -0.02
NIP7-201ENST00000254940 RGL2O15211 777 aa14.94□□□□□ -0.02
NIP7-201ENST00000254940 TAF5LO75529 589 aa14.94□□□□□ -0.02
NIP7-201ENST00000254940 GPR101Q96P66 508 aaPredicted RBP14.94□□□□□ -0.02
NIP7-201ENST00000254940 PLA2G12BQ9BX93 195 aa14.94□□□□□ -0.02
NIP7-201ENST00000254940 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
NIP7-201ENST00000254940 SRGNP10124 158 aa14.94□□□□□ -0.02
NIP7-201ENST00000254940 H0YIN7 160 aa14.93□□□□□ -0.02
NIP7-201ENST00000254940 RPAP2Q8IXW5 612 aaPredicted RBP14.93□□□□□ -0.02
NIP7-201ENST00000254940 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
NIP7-201ENST00000254940 CNNM1Q9NRU3 951 aa14.93□□□□□ -0.02
NIP7-201ENST00000254940 IBTKQ9P2D0 1353 aaPredicted RBP14.93□□□□□ -0.02
NIP7-201ENST00000254940 PDE6BP35913 854 aa14.93□□□□□ -0.02
NIP7-201ENST00000254940 POLA2Q14181 598 aa14.93□□□□□ -0.02
NIP7-201ENST00000254940 LDHAL6AQ6ZMR3 332 aa14.93□□□□□ -0.02
NIP7-201ENST00000254940 PRKCSHP14314 528 aaPredicted RBP14.92□□□□□ -0.02
NIP7-201ENST00000254940 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
NIP7-201ENST00000254940 DCTPP1Q9H773 170 aa14.92□□□□□ -0.02
NIP7-201ENST00000254940 NOP58Q9Y2X3 529 aaKnown RBP14.92□□□□□ -0.02
NIP7-201ENST00000254940 C10orf71Q711Q0 1435 aa14.92□□□□□ -0.02
NIP7-201ENST00000254940 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
NIP7-201ENST00000254940 MPHOSPH8Q99549 860 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms