RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TSHZ3Q63HK5 1081 aa22.94■■□□□ 1.26
TNFSF9-201ENST00000245817 ARHGEF1Q92888 912 aaKnown RBP22.94■■□□□ 1.26
TNFSF9-201ENST00000245817 TTC41PQ6P2S7 1318 aa22.94■■□□□ 1.26
TNFSF9-201ENST00000245817 PHF14O94880 888 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 SEC24BO95487 1268 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 IL15P40933 162 aaPredicted RBP22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 CCDC85AQ96PX6 553 aaPredicted RBP22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 TRIM6-TRIM34B2RNG4 842 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 ADRA2BP18089 450 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 SMIM5Q71RC9 77 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 FBXO3Q9UK99 471 aa22.93■■□□□ 1.26
TNFSF9-201ENST00000245817 ANKRD18BA2A2Z9 1011 aa22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 EYA2O00167 538 aa22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 CIAO1O76071 339 aa22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 MFAP1P55081 439 aaKnown RBP22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 TFCP2Q12800 502 aa22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 BICDL1Q6ZP65 573 aa22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 SETDB2Q96T68 719 aa22.92■■□□□ 1.26
TNFSF9-201ENST00000245817 GLRX3O76003 335 aaKnown RBP22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 GTF2E1P29083 439 aaPredicted RBP22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 TBC1D9Q6ZT07 1266 aa22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 EAF2Q96CJ1 260 aaPredicted RBP22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 ZNF594Q96JF6 807 aaPredicted RBP22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 ECHDC1Q9NTX5 307 aa22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 SRP68Q9UHB9 627 aaKnown RBP22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 C4BP0C0L5 1744 aa22.91■■□□□ 1.26
TNFSF9-201ENST00000245817 NTSR2O95665 410 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 ITGA6P23229 1130 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 RILPL2Q969X0 211 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 NYXQ9GZU5 481 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 USP42Q9H9J4 1324 aaKnown RBP22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 SOCS7O14512 581 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 HCLS1P14317 486 aaPredicted RBP22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 TBC1D9BQ66K14 1250 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 CCDC8Q9H0W5 538 aaPredicted RBP22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 GREM2Q9H772 168 aa22.9■■□□□ 1.26
TNFSF9-201ENST00000245817 TNNI3KQ59H18 835 aa22.89■■□□□ 1.25
TNFSF9-201ENST00000245817 BCL2L12Q9HB09 334 aa22.89■■□□□ 1.25
TNFSF9-201ENST00000245817 FPGT-TNNI3KV9GXZ4 949 aa22.89■■□□□ 1.25
TNFSF9-201ENST00000245817 TAF1LQ8IZX4 1826 aa22.88■■□□□ 1.25
TNFSF9-201ENST00000245817 BCORQ6W2J9 1755 aa22.88■■□□□ 1.25
TNFSF9-201ENST00000245817 CCDC152Q4G0S7 254 aa22.88■■□□□ 1.25
TNFSF9-201ENST00000245817 ATG9AQ7Z3C6 839 aa22.88■■□□□ 1.25
TNFSF9-201ENST00000245817 PI4K2BQ8TCG2 481 aa22.88■■□□□ 1.25
TNFSF9-201ENST00000245817 CEP126Q9P2H0 1117 aa22.88■■□□□ 1.25
TNFSF9-201ENST00000245817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.87■■□□□ 1.25
TNFSF9-201ENST00000245817 LRRC24Q50LG9 513 aa22.87■■□□□ 1.25
TNFSF9-201ENST00000245817 SSFA2P28290 1259 aa22.87■■□□□ 1.25
TNFSF9-201ENST00000245817 LDHAL6AQ6ZMR3 332 aa22.87■■□□□ 1.25
TNFSF9-201ENST00000245817 CNTROBQ8N137 903 aa22.87■■□□□ 1.25
TNFSF9-201ENST00000245817 GPR108Q9NPR9 543 aa22.87■■□□□ 1.25
TNFSF9-201ENST00000245817 AMIGO3Q86WK7 504 aa22.86■■□□□ 1.25
TNFSF9-201ENST00000245817 NBPF5PQ86XG9 351 aaPredicted RBP22.86■■□□□ 1.25
TNFSF9-201ENST00000245817 CNNM1Q9NRU3 951 aa22.86■■□□□ 1.25
TNFSF9-201ENST00000245817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.86■■□□□ 1.25
TNFSF9-201ENST00000245817 NPHP1O15259 732 aa22.85■■□□□ 1.25
TNFSF9-201ENST00000245817 TPTE2Q6XPS3 522 aa22.85■■□□□ 1.25
TNFSF9-201ENST00000245817 PUS3Q9BZE2 481 aaKnown RBP22.85■■□□□ 1.25
TNFSF9-201ENST00000245817 AKAP2Q9Y2D5 859 aa22.85■■□□□ 1.25
TNFSF9-201ENST00000245817 SCN7AQ01118 1682 aa22.84■■□□□ 1.25
TNFSF9-201ENST00000245817 ERFEQ4G0M1 354 aa22.84■■□□□ 1.25
TNFSF9-201ENST00000245817 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
TNFSF9-201ENST00000245817 NEUROD6Q96NK8 337 aa22.84■■□□□ 1.25
TNFSF9-201ENST00000245817 MAP4K4O95819 1239 aaPredicted RBP22.83■■□□□ 1.24
TNFSF9-201ENST00000245817 C22orf23Q9BZE7 217 aa22.83■■□□□ 1.24
TNFSF9-201ENST00000245817 TLR7Q9NYK1 1049 aaKnown RBP22.83■■□□□ 1.24
TNFSF9-201ENST00000245817 METTL24Q5JXM2 366 aa22.82■■□□□ 1.24
TNFSF9-201ENST00000245817 TBC1D32Q96NH3 1257 aa22.82■■□□□ 1.24
TNFSF9-201ENST00000245817 TFCP2L1Q9NZI6 479 aa22.82■■□□□ 1.24
TNFSF9-201ENST00000245817 AKT1S1Q96B36 256 aa22.81■■□□□ 1.24
TNFSF9-201ENST00000245817 MPHOSPH8Q99549 860 aa22.81■■□□□ 1.24
TNFSF9-201ENST00000245817 STK32BQ9NY57 414 aa22.81■■□□□ 1.24
TNFSF9-201ENST00000245817 DBNLQ9UJU6 430 aaKnown RBP22.81■■□□□ 1.24
TNFSF9-201ENST00000245817 IPO9Q96P70 1041 aaKnown RBP22.81■■□□□ 1.24
TNFSF9-201ENST00000245817 IGHMBP2P38935 993 aaKnown RBP22.8■■□□□ 1.24
TNFSF9-201ENST00000245817 SLC15A2Q16348 729 aa22.8■■□□□ 1.24
TNFSF9-201ENST00000245817 SLC10A5Q5PT55 438 aa22.8■■□□□ 1.24
TNFSF9-201ENST00000245817 EVI5LQ96CN4 794 aa22.8■■□□□ 1.24
TNFSF9-201ENST00000245817 DBNDD2Q9BQY9 259 aa22.8■■□□□ 1.24
TNFSF9-201ENST00000245817 RIPOR2Q9Y4F9 1068 aa22.8■■□□□ 1.24
TNFSF9-201ENST00000245817 MYH3P11055 1940 aa22.79■■□□□ 1.24
TNFSF9-201ENST00000245817 REC8O95072 547 aa22.79■■□□□ 1.24
TNFSF9-201ENST00000245817 TIMM10P62072 90 aa22.79■■□□□ 1.24
TNFSF9-201ENST00000245817 NLRP3Q96P20 1036 aa22.79■■□□□ 1.24
TNFSF9-201ENST00000245817 CDC5LQ99459 802 aaKnown RBP22.79■■□□□ 1.24
TNFSF9-201ENST00000245817 BOLA2Q9H3K6 86 aa22.79■■□□□ 1.24
TNFSF9-201ENST00000245817 CARMIL3Q8ND23 1372 aa22.78■■□□□ 1.24
TNFSF9-201ENST00000245817 RTL9Q8NET4 1388 aa22.78■■□□□ 1.24
TNFSF9-201ENST00000245817 A0A1B0GUL7 405 aa22.78■■□□□ 1.24
TNFSF9-201ENST00000245817 ATP5JP18859 108 aa22.78■■□□□ 1.24
TNFSF9-201ENST00000245817 ZNF827Q17R98 1081 aa22.78■■□□□ 1.24
TNFSF9-201ENST00000245817 CHMLP26374 656 aa22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 SF3B3Q15393 1217 aaKnown RBP22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 GORABQ5T7V8 394 aa22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 MROH5Q6ZUA9 1318 aa22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 NFIXQ14938 502 aa22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 FLAD1Q8NFF5 587 aa22.77■■□□□ 1.24
TNFSF9-201ENST00000245817 SEC31BQ9NQW1 1179 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms