RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 BTBD11A6QL63 1104 aa14.25□□□□□ -0.13
SEC61A1-201ENST00000243253 ZNF589Q86UQ0 364 aaPredicted RBP14.25□□□□□ -0.13
SEC61A1-201ENST00000243253 ABCC6O95255 1503 aa14.25□□□□□ -0.13
SEC61A1-201ENST00000243253 PKD1L3Q7Z443 1732 aa14.25□□□□□ -0.13
SEC61A1-201ENST00000243253 PLA2G4DQ86XP0 818 aa14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 CLASRPQ8N2M8 674 aaKnown RBP14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 ADAMTSL3P82987 1691 aa14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 ANKRD7Q92527 254 aa14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 CCDC94Q9BW85 323 aaPredicted RBP14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 BICC1Q9H694 974 aaKnown RBP14.24□□□□□ -0.13
SEC61A1-201ENST00000243253 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 RUFY2Q8WXA3 655 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 FAM173BQ6P4H8 233 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 PGBD1Q96JS3 809 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 TMEM94Q12767 1356 aa14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 RFX5P48382 616 aaPredicted RBP14.23□□□□□ -0.13
SEC61A1-201ENST00000243253 ERC1Q8IUD2 1116 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 SMAP1Q8IYB5 467 aaPredicted RBP14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 KAT6BQ8WYB5 2073 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 PARP4Q9UKK3 1724 aaKnown RBP14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 FGD1P98174 961 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 GRM8O00222 908 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 TAF5LO75529 589 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 EPHA10Q5JZY3 1008 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 FAM200AQ8TCP9 573 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 ZNF609O15014 1411 aa14.22□□□□□ -0.13
SEC61A1-201ENST00000243253 PDIA4P13667 645 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 ZSCAN20P17040 1043 aaPredicted RBP14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 AACSQ86V21 672 aa14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 EDC3Q96F86 508 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 ATP5J2-PTCD1G3V325 749 aa14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 PTCD1O75127 700 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 ARHGEF25Q86VW2 580 aa14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 BOLA2Q9H3K6 86 aa14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
SEC61A1-201ENST00000243253 RFX7Q2KHR2 1363 aa14.21□□□□□ -0.14
SEC61A1-201ENST00000243253 TYRO3Q06418 890 aa14.21□□□□□ -0.14
SEC61A1-201ENST00000243253 LARP1Q6PKG0 1096 aaKnown RBP14.21□□□□□ -0.14
SEC61A1-201ENST00000243253 PHF8Q9UPP1 1060 aa14.21□□□□□ -0.14
SEC61A1-201ENST00000243253 CEBPZQ03701 1054 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 RESTQ13127 1097 aa14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 IFIT2P09913 472 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 CHGBP05060 677 aa14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 LUZP1Q86V48 1076 aa14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 TDRD7Q8NHU6 1098 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
SEC61A1-201ENST00000243253 CCDC192P0DO97 292 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 RIC3Q7Z5B4 369 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 AXIN2Q9Y2T1 843 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 NR1I2O75469 434 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 THEMISQ8N1K5 641 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 DNAJC2Q99543 621 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 CLSTN2Q9H4D0 955 aa14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
SEC61A1-201ENST00000243253 C4AP0C0L4 1744 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 HIP1O00291 1037 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 SALL1Q9NSC2 1324 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 ECM29Q5VYK3 1845 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 KRT85P78386 507 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 CHMP4AQ9BY43 222 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 NRBP1Q9UHY1 535 aa14.18□□□□□ -0.14
SEC61A1-201ENST00000243253 NEURL1BA8MQ27 555 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 IQCB1Q15051 598 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 LRRC2Q9BYS8 371 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 DACT1Q9NYF0 836 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 CASP7P55210 303 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 MAP3K11Q16584 847 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 PTGS1P23219 599 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 HMG20BQ9P0W2 317 aa14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 DBNLQ9UJU6 430 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-201ENST00000243253 NEDD4P46934 1319 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 TPM3P06753 285 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 CAMK4Q16566 473 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 COPRSQ9NQ92 184 aa14.16□□□□□ -0.14
SEC61A1-201ENST00000243253 JAK2O60674 1132 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms