RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
SLF2-201ENST00000238961 WAPLQ7Z5K2 1190 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
SLF2-201ENST00000238961 ZNF530Q6P9A1 599 aaPredicted RBP11.68□□□□□ -0.54
SLF2-201ENST00000238961 PPFIBP2Q8ND30 876 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.68□□□□□ -0.548e-7■■■□□ 16.4
SLF2-201ENST00000238961 CCDC129Q6ZRS4 1044 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 CCDC25Q86WR0 208 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 EXOC1Q9NV70 894 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
SLF2-201ENST00000238961 SFMBT1Q9UHJ3 866 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.68□□□□□ -0.54
SLF2-201ENST00000238961 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
SLF2-201ENST00000238961 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 IGF1RP08069 1367 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 DAPK3O43293 454 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 CEP85LQ5SZL2 805 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 PRPHP41219 470 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 AFAP1L2Q8N4X5 818 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 IFT140Q96RY7 1462 aa11.68□□□□□ -0.54
SLF2-201ENST00000238961 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 INF2Q27J81 1249 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 LCA5Q86VQ0 697 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 ACRBPQ8NEB7 543 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 CHMP6Q96FZ7 201 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 ERMNQ8TAM6 284 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 GOLGA1Q92805 767 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 TRIM6Q9C030 488 aaPredicted RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 SMIM24O75264 130 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 CCT6AP40227 531 aaKnown RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 LRRC27Q9C0I9 530 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 IRAK4Q9NWZ3 460 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 B4DLN1 442 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 SRGAP3O43295 1099 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 MRPL12P52815 198 aaKnown RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 TWISTNBQ3B726 338 aaPredicted RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 CCDC121Q6ZUS5 278 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 FERMT3Q86UX7 667 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 BTBD11A6QL63 1104 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 IFIT3O14879 490 aaKnown RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 AKR1B10O60218 316 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 UBA7P41226 1012 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 FMNL3Q8IVF7 1028 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
SLF2-201ENST00000238961 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
SLF2-201ENST00000238961 KIF21BO75037 1637 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 ESYT2A0FGR8 921 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
SLF2-201ENST00000238961 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 FRMD4BQ9Y2L6 1034 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 K7ELQ4 463 aaPredicted RBP11.66□□□□□ -0.54
SLF2-201ENST00000238961 CALCOCO2Q13137 446 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 CLUL1Q15846 466 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 SH2D4BQ5SQS7 431 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 TRIM47Q96LD4 638 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 SUDS3Q9H7L9 328 aaPredicted RBP11.66□□□□□ -0.54
SLF2-201ENST00000238961 GRPEL1Q9HAV7 217 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 CUX1P39880 1505 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 ARHGAP5Q13017 1502 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 SLC5A1P13866 664 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 PNISRQ8TF01 805 aaKnown RBP11.66□□□□□ -0.54
SLF2-201ENST00000238961 ATP2A3Q93084 1043 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 SLC8A3P57103 927 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 TMC6Q7Z403 805 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 FAM204AQ9H8W3 233 aa11.66□□□□□ -0.54
SLF2-201ENST00000238961 PANK2Q9BZ23 570 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 KCNA4P22459 653 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 ARID5AQ03989 594 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 NEDD9Q14511 834 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
SLF2-201ENST00000238961 PLCB4Q15147 1175 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 PPP1R7Q15435 360 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 TMTC4Q5T4D3 741 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 GKAP1Q5VSY0 366 aaPredicted RBP11.65□□□□□ -0.54
SLF2-201ENST00000238961 RAB11FIP4Q86YS3 637 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 GABPB2Q8TAK5 448 aaPredicted RBP11.65□□□□□ -0.54
SLF2-201ENST00000238961 ATP6V0A2Q9Y487 856 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 BCAR3O75815 825 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 SETSIPP0DME0 302 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 FAM160A1Q05DH4 1040 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 TSPY2A6NKD2 308 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 ZNF213O14771 459 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 MAFGO15525 162 aa11.65□□□□□ -0.54
SLF2-201ENST00000238961 CPSF2Q9P2I0 782 aaKnown RBP11.65□□□□□ -0.55
SLF2-201ENST00000238961 BIN1O00499 593 aa11.64□□□□□ -0.55
SLF2-201ENST00000238961 RNF41Q9H4P4 317 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms