RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
COL1A1-201ENST00000225964 PPP1R14CQ8TAE6 165 aa15.17■□□□□ 0.02
COL1A1-201ENST00000225964 CCDC184Q52MB2 194 aa15.17■□□□□ 0.02
COL1A1-201ENST00000225964 ZCRB1Q8TBF4 217 aaKnown RBP15.17■□□□□ 0.02
COL1A1-201ENST00000225964 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
COL1A1-201ENST00000225964 IKBKGQ9Y6K9 419 aa15.17■□□□□ 0.02
COL1A1-201ENST00000225964 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 MAATS1Q7Z4T9 603 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 GIMAP7Q8NHV1 300 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 PTPN23Q9H3S7 1636 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 POLD1P28340 1107 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 STAT6P42226 847 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 KRT23Q9C075 422 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 PI4KAP2A4QPH2 592 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 PI4KAP1Q8N8J0 262 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 MRVI1Q9Y6F6 885 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
COL1A1-201ENST00000225964 KRT13P13646 458 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 JADE2Q9NQC1 790 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 ANXA1P04083 346 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 SERPINA10Q9UK55 444 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 FAM83GA6ND36 823 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 SSFA2P28290 1259 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 MCM5P33992 734 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 AFMP43652 599 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 LRSAM1Q6UWE0 723 aa15.15■□□□□ 0.02
COL1A1-201ENST00000225964 NIP7Q9Y221 180 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL1A1-201ENST00000225964 RIMBP2O15034 1052 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 NCBP1Q09161 790 aaKnown RBP15.14■□□□□ 0.01
COL1A1-201ENST00000225964 RRAGBQ5VZM2 374 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 RMND1Q9NWS8 449 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 GJC1P36383 396 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 IFI16Q16666 785 aaKnown RBP15.14■□□□□ 0.01
COL1A1-201ENST00000225964 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 GDPD2Q9HCC8 539 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
COL1A1-201ENST00000225964 NAA16Q6N069 864 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-201ENST00000225964 NLRP3Q96P20 1036 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 ACEP12821 1306 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 TMEM110-MUSTN1A8MSY1 372 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 TERF1P54274 439 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-201ENST00000225964 NOS1P29475 1434 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 CCDC175P0C221 793 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 NAPAP54920 295 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 TICAM2Q86XR7 235 aa15.14■□□□□ 0.01
COL1A1-201ENST00000225964 ABCC5O15440 1437 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 TOM1O60784 492 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
COL1A1-201ENST00000225964 NYXQ9GZU5 481 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 ADGRF5Q8IZF2 1346 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 CTR9Q6PD62 1173 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 CHPF2Q9P2E5 772 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 DNMBPQ6XZF7 1577 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 POLR3GO15318 223 aaPredicted RBP15.13■□□□□ 0.01
COL1A1-201ENST00000225964 USP37Q86T82 979 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 MAGEB6P1A0A0J9YX57 407 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 A0A1W2PRG0 241 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 TAF12Q16514 161 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 RTN1Q16799 776 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 TFCP2L1Q9NZI6 479 aa15.13■□□□□ 0.01
COL1A1-201ENST00000225964 SREK1Q8WXA9 508 aaKnown RBP15.12■□□□□ 0.01
COL1A1-201ENST00000225964 TTC12Q9H892 705 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-201ENST00000225964 CCDC102BQ68D86 513 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 HMG20BQ9P0W2 317 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-201ENST00000225964 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 ZBTB43O43298 467 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-201ENST00000225964 KIAA0753Q2KHM9 967 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 C20orf194Q5TEA3 1177 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 MICALCLQ6ZW33 695 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 IL27Q8NEV9 243 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 ESR2Q92731 530 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 TCHPQ9BT92 498 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 USP25Q9UHP3 1055 aa15.12■□□□□ 0.01
COL1A1-201ENST00000225964 TRAF1Q13077 416 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 TOP2BQ02880 1626 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 ALG1Q9BT22 464 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 AKNAD1Q5T1N1 836 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 GSDMDP57764 484 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 XAGE3Q8WTP9 111 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
COL1A1-201ENST00000225964 PCF11O94913 1555 aaKnown RBP15.11■□□□□ 0.01
COL1A1-201ENST00000225964 B4DLN1 442 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 TRIM27P14373 513 aa15.1■□□□□ 0.01
COL1A1-201ENST00000225964 MRPL12P52815 198 aaKnown RBP15.1■□□□□ 0.01
COL1A1-201ENST00000225964 C16orf45Q96MC5 204 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-201ENST00000225964 PAIP2Q9BPZ3 127 aaKnown RBP15.1■□□□□ 0.01
COL1A1-201ENST00000225964 CNNM2Q9H8M5 875 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms