RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 SLC27A2O14975 620 aa18.24■□□□□ 0.51
TGFB1-201ENST00000221930 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
TGFB1-201ENST00000221930 ATP6V1DQ9Y5K8 247 aa18.23■□□□□ 0.51
TGFB1-201ENST00000221930 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
TGFB1-201ENST00000221930 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
TGFB1-201ENST00000221930 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
TGFB1-201ENST00000221930 CABLES1Q8TDN4 633 aa18.23■□□□□ 0.51
TGFB1-201ENST00000221930 ZSCAN31Q96LW9 406 aaPredicted RBP18.23■□□□□ 0.51
TGFB1-201ENST00000221930 SH2B1Q9NRF2 756 aaPredicted RBP18.23■□□□□ 0.51
TGFB1-201ENST00000221930 CCDC39Q9UFE4 941 aa18.23■□□□□ 0.51
TGFB1-201ENST00000221930 CHGBP05060 677 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 PHKG2P15735 406 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 FERMT3Q86UX7 667 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 ZNF500O60304 480 aaPredicted RBP18.22■□□□□ 0.51
TGFB1-201ENST00000221930 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
TGFB1-201ENST00000221930 ATP5J2-PTCD1G3V325 749 aa18.21■□□□□ 0.51
TGFB1-201ENST00000221930 HIP1O00291 1037 aa18.21■□□□□ 0.51
TGFB1-201ENST00000221930 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
TGFB1-201ENST00000221930 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
TGFB1-201ENST00000221930 TATP17735 454 aaPredicted RBP18.21■□□□□ 0.51
TGFB1-201ENST00000221930 FAM173BQ6P4H8 233 aa18.21■□□□□ 0.51
TGFB1-201ENST00000221930 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
TGFB1-201ENST00000221930 METTL22Q9BUU2 404 aaPredicted RBP18.21■□□□□ 0.51
TGFB1-201ENST00000221930 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
TGFB1-201ENST00000221930 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
TGFB1-201ENST00000221930 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
TGFB1-201ENST00000221930 CHRNA2Q15822 529 aa18.2■□□□□ 0.5
TGFB1-201ENST00000221930 LARP1BQ659C4 914 aaKnown RBP18.2■□□□□ 0.5
TGFB1-201ENST00000221930 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
TGFB1-201ENST00000221930 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
TGFB1-201ENST00000221930 HSPA2P54652 639 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 STK3Q13188 491 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
TGFB1-201ENST00000221930 TFCP2Q12800 502 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 CDC37L1Q7L3B6 337 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 PSMA5P28066 241 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
TGFB1-201ENST00000221930 TMEM51Q9NW97 253 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 MEGF6O75095 1541 aa18.19■□□□□ 0.5
TGFB1-201ENST00000221930 PTPN12Q05209 780 aaKnown RBP18.18■□□□□ 0.5
TGFB1-201ENST00000221930 RNF20Q5VTR2 975 aa18.18■□□□□ 0.5
TGFB1-201ENST00000221930 LRP10Q7Z4F1 713 aa18.18■□□□□ 0.5
TGFB1-201ENST00000221930 IFNL2Q8IZJ0 200 aa18.18■□□□□ 0.5
TGFB1-201ENST00000221930 C5P01031 1676 aa18.18■□□□□ 0.5
TGFB1-201ENST00000221930 PAPPAQ13219 1627 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 CYP27B1O15528 508 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 PLCB2Q00722 1185 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 FAM184AQ8NB25 1140 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 SEC62Q99442 399 aaKnown RBP18.17■□□□□ 0.5
TGFB1-201ENST00000221930 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
TGFB1-201ENST00000221930 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.17■□□□□ 0.52e-7■■□□□ 13.3
TGFB1-201ENST00000221930 MED23Q9ULK4 1368 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 COL22A1Q8NFW1 1626 aaPredicted RBP18.17■□□□□ 0.5
TGFB1-201ENST00000221930 TAF5LO75529 589 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 SNRPA1P09661 255 aaKnown RBP18.17■□□□□ 0.5
TGFB1-201ENST00000221930 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 SNRKQ9NRH2 765 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 SLAIN2Q9P270 581 aa18.17■□□□□ 0.5
TGFB1-201ENST00000221930 RPS6KB1P23443 525 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 TOB2Q14106 344 aaPredicted RBP18.16■□□□□ 0.5
TGFB1-201ENST00000221930 TNNI3KQ59H18 835 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 PPP4R3BQ5MIZ7 849 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 FPGT-TNNI3KV9GXZ4 949 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 UBR2Q8IWV8 1755 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 COL15A1P39059 1388 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 A0A087WZG4 1122 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
TGFB1-201ENST00000221930 COPRSQ9NQ92 184 aa18.16■□□□□ 0.5
TGFB1-201ENST00000221930 ADCY5O95622 1261 aa18.15■□□□□ 0.5
TGFB1-201ENST00000221930 MCM5P33992 734 aa18.15■□□□□ 0.5
TGFB1-201ENST00000221930 DCAF5Q96JK2 942 aa18.15■□□□□ 0.5
TGFB1-201ENST00000221930 COL5A2P05997 1499 aaPredicted RBP18.15■□□□□ 0.5
TGFB1-201ENST00000221930 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
TGFB1-201ENST00000221930 KIF20AO95235 890 aa18.15■□□□□ 0.5
TGFB1-201ENST00000221930 TTC6Q86TZ1 520 aa18.15■□□□□ 0.5
TGFB1-201ENST00000221930 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
TGFB1-201ENST00000221930 FAM13BQ9NYF5 915 aa18.14■□□□□ 0.5
TGFB1-201ENST00000221930 AHDC1Q5TGY3 1603 aaPredicted RBP18.14■□□□□ 0.5
TGFB1-201ENST00000221930 WDR17Q8IZU2 1322 aa18.14■□□□□ 0.49
TGFB1-201ENST00000221930 CSPP1Q1MSJ5 1256 aa18.14■□□□□ 0.49
TGFB1-201ENST00000221930 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
TGFB1-201ENST00000221930 ATP5JP18859 108 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 UVSSAQ2YD98 709 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 TFIP11Q9UBB9 837 aaKnown RBP18.13■□□□□ 0.49
TGFB1-201ENST00000221930 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 CAMK4Q16566 473 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 FUCA2Q9BTY2 467 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 ANKRD1Q15327 319 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
TGFB1-201ENST00000221930 PLCH1Q4KWH8 1693 aa18.12■□□□□ 0.49
TGFB1-201ENST00000221930 ZSCAN20P17040 1043 aaPredicted RBP18.12■□□□□ 0.49
TGFB1-201ENST00000221930 CABP4P57796 275 aa18.12■□□□□ 0.49
TGFB1-201ENST00000221930 KRT85P78386 507 aa18.12■□□□□ 0.49
TGFB1-201ENST00000221930 LMBR1LQ6UX01 489 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms