RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 SLC15A2Q16348 729 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 SLC10A5Q5PT55 438 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 C16orf71Q8IYS4 520 aaPredicted RBP19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 DDX60Q8IY21 1712 aaKnown RBP19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 CARMIL3Q8ND23 1372 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 PNPLA7Q6ZV29 1317 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 TM4SF1P30408 202 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 IFIT5Q13325 482 aaKnown RBP19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 CCDC85AQ96PX6 553 aaPredicted RBP19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 SIL1Q9H173 461 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 STK32BQ9NY57 414 aa19.7■□□□□ 0.74
SNRPD3-201ENST00000215829 LAMB2P55268 1798 aa19.69■□□□□ 0.74
SNRPD3-201ENST00000215829 GREM2Q9H772 168 aa19.69■□□□□ 0.74
SNRPD3-201ENST00000215829 MSH5O43196 834 aa19.68■□□□□ 0.74
SNRPD3-201ENST00000215829 SASH1O94885 1247 aa19.68■□□□□ 0.74
SNRPD3-201ENST00000215829 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
SNRPD3-201ENST00000215829 IL1RAPL2Q9NP60 686 aa19.68■□□□□ 0.74
SNRPD3-201ENST00000215829 ITGA6P23229 1130 aa19.67■□□□□ 0.74
SNRPD3-201ENST00000215829 PLEKHM2Q8IWE5 1019 aa19.67■□□□□ 0.74
SNRPD3-201ENST00000215829 NLGN1Q8N2Q7 840 aa19.67■□□□□ 0.74
SNRPD3-201ENST00000215829 ANKRD18BA2A2Z9 1011 aa19.67■□□□□ 0.74
SNRPD3-201ENST00000215829 ZNF594Q96JF6 807 aaPredicted RBP19.67■□□□□ 0.74
SNRPD3-201ENST00000215829 FBXO3Q9UK99 471 aa19.67■□□□□ 0.74
SNRPD3-201ENST00000215829 CIAO1O76071 339 aa19.66■□□□□ 0.74
SNRPD3-201ENST00000215829 CCDC152Q4G0S7 254 aa19.66■□□□□ 0.74
SNRPD3-201ENST00000215829 OTUD7AQ8TE49 926 aaPredicted RBP19.66■□□□□ 0.74
SNRPD3-201ENST00000215829 EYA2O00167 538 aa19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 SF3B3Q15393 1217 aaKnown RBP19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 TAF7LQ5H9L4 462 aa19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 CLASRPQ8N2M8 674 aaKnown RBP19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 QSER1Q2KHR3 1735 aa19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 RTL9Q8NET4 1388 aa19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 ABCC12Q96J65 1359 aa19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 IL15P40933 162 aaPredicted RBP19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 ATG9AQ7Z3C6 839 aa19.65■□□□□ 0.74
SNRPD3-201ENST00000215829 SALL3Q9BXA9 1300 aa19.64■□□□□ 0.74
SNRPD3-201ENST00000215829 NPHP1O15259 732 aa19.64■□□□□ 0.73
SNRPD3-201ENST00000215829 SERPINB2P05120 415 aa19.64■□□□□ 0.73
SNRPD3-201ENST00000215829 CNBD1Q8NA66 436 aa19.64■□□□□ 0.73
SNRPD3-201ENST00000215829 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
SNRPD3-201ENST00000215829 LRRC24Q50LG9 513 aa19.63■□□□□ 0.73
SNRPD3-201ENST00000215829 OSBPL3Q9H4L5 887 aa19.63■□□□□ 0.73
SNRPD3-201ENST00000215829 POLRMTO00411 1230 aaKnown RBP19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 DDR1Q08345 913 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 PRR5LQ6MZQ0 368 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 PUS3Q9BZE2 481 aaKnown RBP19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 MX1P20591 662 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 PDE1AP54750 535 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 TFCP2Q12800 502 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 CCDC24Q8N4L8 307 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 STAP2Q9UGK3 403 aa19.62■□□□□ 0.73
SNRPD3-201ENST00000215829 LDHAL6AQ6ZMR3 332 aa19.61■□□□□ 0.73
SNRPD3-201ENST00000215829 SEC31BQ9NQW1 1179 aa19.61■□□□□ 0.73
SNRPD3-201ENST00000215829 EAF2Q96CJ1 260 aaPredicted RBP19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 RIPOR2Q9Y4F9 1068 aa19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 CASZ1Q86V15 1759 aa19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 RIC1Q4ADV7 1423 aa19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 IFIT2P09913 472 aaKnown RBP19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 ST5P78524 1137 aa19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 BMP2KLQ5H9B9 411 aa19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 AACSQ86V21 672 aa19.6■□□□□ 0.73
SNRPD3-201ENST00000215829 TNNI3KQ59H18 835 aa19.59■□□□□ 0.73
SNRPD3-201ENST00000215829 TTC22Q5TAA0 569 aa19.59■□□□□ 0.73
SNRPD3-201ENST00000215829 UPF1Q92900 1129 aaKnown RBP eCLIP19.59■□□□□ 0.733e-7■■■□□ 18.5
SNRPD3-201ENST00000215829 GPR108Q9NPR9 543 aa19.59■□□□□ 0.73
SNRPD3-201ENST00000215829 CEP126Q9P2H0 1117 aa19.59■□□□□ 0.73
SNRPD3-201ENST00000215829 FPGT-TNNI3KV9GXZ4 949 aa19.59■□□□□ 0.73
SNRPD3-201ENST00000215829 AOX1Q06278 1338 aa19.58■□□□□ 0.73
SNRPD3-201ENST00000215829 CDC5LQ99459 802 aaKnown RBP19.58■□□□□ 0.73
SNRPD3-201ENST00000215829 CNNM1Q9NRU3 951 aa19.58■□□□□ 0.73
SNRPD3-201ENST00000215829 MMP10P09238 476 aa19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 MPHOSPH8Q99549 860 aa19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 LRP5O75197 1615 aa19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 MSL1Q68DK7 614 aa19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 PARP3Q9Y6F1 533 aa19.57■□□□□ 0.72
SNRPD3-201ENST00000215829 TTC41PQ6P2S7 1318 aa19.56■□□□□ 0.72
SNRPD3-201ENST00000215829 GSPT1P15170 499 aaKnown RBP19.56■□□□□ 0.72
SNRPD3-201ENST00000215829 TSHZ3Q63HK5 1081 aa19.56■□□□□ 0.72
SNRPD3-201ENST00000215829 BACH2Q9BYV9 841 aa19.56■□□□□ 0.72
SNRPD3-201ENST00000215829 NRXN2Q9P2S2 1712 aa19.56■□□□□ 0.72
SNRPD3-201ENST00000215829 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
SNRPD3-201ENST00000215829 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 METTL24Q5JXM2 366 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 ANKRD18AQ8IVF6 992 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 GPATCH3Q96I76 525 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 AKAP2Q9Y2D5 859 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 MROH5Q6ZUA9 1318 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 ECHDC1Q9NTX5 307 aa19.55■□□□□ 0.72
SNRPD3-201ENST00000215829 CRY2Q49AN0 593 aa19.54■□□□□ 0.72
SNRPD3-201ENST00000215829 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
SNRPD3-201ENST00000215829 PI4K2BQ8TCG2 481 aa19.54■□□□□ 0.72
SNRPD3-201ENST00000215829 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
SNRPD3-201ENST00000215829 TIMM10P62072 90 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms