RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Panx2Q6IMP4 677 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Golph3lQ8R088 285 aaKnown RBP17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Eif2ak3Q9Z2B5 1114 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Cps1Q8C196 1500 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Maats1Q8BRC6 783 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Zfp113Q8C689 439 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Epc1Q8C9X6 813 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Arl8aQ8VEH3 186 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Rims2Q9EQZ7 1530 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Evi5P97366 809 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Map9Q3TRR0 646 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Fchsd2Q3USJ8 740 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Tmco3Q8BH01 678 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Me3Q8BMF3 604 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Abcb6Q9DC29 842 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Gnai2P08752 355 aaKnown RBP17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Psen1P49769 467 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ccdc57Q6PHN1 1016 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Dnaaf4Q8R368 420 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Dact1Q8R4A3 778 aa17.21■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Evc2Q8K1G2 1220 aa17.2■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Plcd1Q8R3B1 756 aa17.2■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Zeb2Q9R0G7 1215 aa17.2■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Acbd5Q5XG73 508 aa17.2■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Dhx40Q6PE54 779 aaKnown RBP17.2■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Atp7bQ64446 1462 aa17.2■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Ifit1Q64282 463 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Bmp2kQ91Z96 1138 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Atp1a4Q9WV27 1032 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Bin1O08539 588 aaKnown RBP17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Cavin2Q63918 418 aaKnown RBP17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Spata16Q8C636 571 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Xpo4Q9ESJ0 1151 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Mmp8O70138 465 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Smarcc2Q6PDG5 1213 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Zkscan3Q91VW9 553 aa17.19■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Kif3cO35066 796 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Atp1a3Q6PIC6 1013 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Atp1a2Q6PIE5 1020 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Tada3Q8R0L9 432 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Ktn1Q61595 1327 aaKnown RBP17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Phlpp1Q8CHE4 1687 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Pde11aP0C1Q2 933 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Fam83gQ5SWY7 812 aa17.18■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Chl1P70232 1209 aa17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Cbx8Q9QXV1 362 aa17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Rimbp3Q3V0F0 1606 aa17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 XpcP51612 930 aa17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Sv2bQ8BG39 683 aa17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Etf1Q8BWY3 437 aaKnown RBP17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Chaf1aQ9QWF0 911 aa17.17■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Dnajc25A2ALW5 357 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Brf1Q8CFK2 676 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Tbc1d4Q8BYJ6 1307 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Exoc3l2D3YUP5 789 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Sparcl1P70663 650 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Usp28Q5I043 1051 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Ctr9Q62018 1173 aaKnown RBP17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Ncoa7Q6DFV7 943 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Fhod1Q6P9Q4 1197 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Cep89Q9CZX2 791 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Dusp10Q9ESS0 483 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Med1Q925J9 1575 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Stx1aO35526 288 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Top1mtQ8R4U6 593 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Sh2b1Q91ZM2 756 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Bloc1s2Q9CWG9 143 aa17.16■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Q8BZJ8 459 aa17.15■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Nwd1A6H603 1563 aa17.15■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Snap23O09044 210 aa17.15■□□□□ 0.34
Ebf3-208ENSMUST00000210774 CtcfQ61164 736 aaKnown RBP17.15■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Efcab8Q8C9R9 203 aa17.15■□□□□ 0.34
Ebf3-208ENSMUST00000210774 Cnbd1B1AWM0 430 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Ubxn4Q8VCH8 506 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Add2Q9QYB8 725 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Kifc2O08672 792 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Eef2kO08796 724 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Rnaseh1O70338 285 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Slc7a3P70423 618 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Slc4a10Q5DTL9 1118 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Ifit2Q64112 472 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Cfap100Q80VN0 613 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Unc13bQ9Z1N9 1602 aa17.14■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Prim1P20664 417 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Plcb3P51432 1234 aaKnown RBP17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Ctnna3Q65CL1 895 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 4930550L24RikQ99PA7 320 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Nphp3Q7TNH6 1325 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Rgs22G3UYX5 1258 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Phf23Q8BSN5 401 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 ZwintQ9CQU5 252 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Jakmip2D3YXK0 820 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 MecomP14404 1042 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Adcy2Q80TL1 1090 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Ano1Q8BHY3 960 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Zswim4Q8C7B8 1101 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Iffo2Q8R2V2 512 aa17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Kri1Q8VDQ9 704 aaKnown RBP17.13■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Clec11aO88200 328 aa17.12■□□□□ 0.33
Ebf3-208ENSMUST00000210774 Foxd1Q61345 456 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms