RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Ccdc122Q8BVN0 290 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Fam186bD3Z420 943 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Nucb2P81117 420 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Gas8Q60779 478 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Asic1Q6NXK8 526 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Pdcl2Q78Y63 240 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Ctdp1Q7TSG2 960 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Znf428Q8C1M2 176 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Cnnm2Q3TWN3 875 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 P4ha1Q60715 534 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Gimap8Q75N62 688 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Gimap5Q8BWF2 308 aa13.42□□□□□ -0.26
Scn8a-208ENSMUST00000200963 GmnnO88513 206 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Rbm8a2A0A0N4SUH6 174 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Calm1P0DP26 149 aaKnown RBP13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Calm2P0DP27 149 aaKnown RBP13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Calm3P0DP28 149 aaKnown RBP13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Dzip1lQ499E4 774 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Fam160b2Q80YR2 744 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Cdca8Q8BHX3 289 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Rbm8aQ9CWZ3 174 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Letm1Q9Z2I0 738 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Frmpd2A0A140LI67 1392 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Lmod1Q8BVA4 595 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Myl6bQ8CI43 207 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Lmbr1lQ9D1E5 489 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Pik3ap1Q9EQ32 811 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Ankrd13dQ6PD24 605 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Gramd4Q8CB44 633 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 TchhA0A0B4J1F9 1599 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Sbno1Q689Z5 1390 aa13.41□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Sept14Q9DA97 430 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Serpinb6bO08804 377 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Gbp8Q2V6D6 525 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Smarcc2Q6PDG5 1213 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Dzip1Q8BMD2 852 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Bicd1Q8BR07 835 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Atp8b3Q6UQ17 1335 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Capn12Q9ER56 720 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Mug1P28665 1476 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Usp37Q8C0R0 979 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Zswim4Q8C7B8 1101 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Naip2Q9QUK4 1447 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Magi1Q6RHR9 1471 aa13.4□□□□□ -0.26
Scn8a-208ENSMUST00000200963 Tldc2A2ACG1 198 aa13.4□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Dennd3A2RT67 1274 aa13.4□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Vps41Q5KU39 853 aa13.4□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Caskin1Q6P9K8 1431 aa13.4□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Gbp7Q91Z40 638 aa13.4□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Mtmr7Q9Z2C9 660 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Polr3aB2RXC6 1390 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Akr1c19G3X9Y6 323 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 MarcksP26645 309 aaKnown RBP13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Syt1P46096 421 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Tbc1d32Q3URV1 1296 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Glg1Q61543 1175 aaKnown RBP13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Ano8Q6PB70 1060 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Snx13Q6PHS6 957 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Gigyf2Q6Y7W8 1291 aaKnown RBP13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Slc4a8Q8JZR6 1089 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Atp2b3Q0VF55 1220 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Ccdc6D3YZP9 469 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Fam76aQ922G2 307 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Tacc3Q9JJ11 631 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Abcc5Q9R1X5 1436 aa13.39□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Gm28919A0A087WP35 240 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Clul1Q3ZRW6 464 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Kiaa1211Q5PR69 1207 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Xrcc4Q924T3 326 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Mrps25Q9D125 171 aaKnown RBP13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Hip1rQ9JKY5 1068 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Mrc2Q64449 1479 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Setdb1O88974 1307 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Specc1lQ2KN98 1118 aaKnown RBP13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Cnksr2Q80YA9 1032 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Rad50P70388 1312 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Speer4f2E9Q366 295 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Tcerg1lQ3B807 590 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Zmynd15Q8C0R7 736 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Myl3P09542 204 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Nkx1-2P42580 305 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Tmem132eQ6IEE6 982 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 SltmQ8CH25 1031 aaKnown RBP13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 FanclQ9CR14 375 aa13.38□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Zfp213E9QAW0 468 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Capza3P70190 299 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Hdac9Q99N13 588 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Arl1P61211 181 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Uba5Q8VE47 403 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Tagap1P0CAX8 505 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Ccdc129Q14B48 1034 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Fgfr1opQ66JX5 399 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Neo1P97798 1493 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 OvosQ3UU35 1456 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Igf1rQ60751 1373 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 PaskQ8CEE6 1383 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Armc3A2AU72 881 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Samd15F6XZJ7 620 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 GnaqP21279 359 aa13.37□□□□□ -0.27
Scn8a-208ENSMUST00000200963 Stmn4P63042 189 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms