RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Rassf4Q8CB96 322 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Gtpbp4Q99ME9 634 aaKnown RBP20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Znf704Q9ERQ3 566 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Dnm1P39053 867 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Talpid3E9PV87 1520 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Luc7l2Q7TNC4 392 aaKnown RBP20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Tbc1d7Q9D0K0 293 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Zbtb43Q9DAI4 467 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Ripk4Q9ERK0 786 aa20.42■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 EappQ5BU09 281 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Themis2Q91YX0 663 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 WtapQ9ER69 396 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Ccdc155Q80VJ8 648 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Nsd3Q6P2L6 1439 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Speer4aF8VPX6 267 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Ier5O89113 308 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Gdpd2Q9ESM6 539 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Eif4a2P10630 407 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Fam107bQ3TGF2 131 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Podxl2Q8CAE9 603 aa20.41■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Aox1O54754 1333 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Clec11aO88200 328 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Prr29B1ARI9 187 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Krt79Q8VED5 531 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Syce1Q9D495 329 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Uso1Q9Z1Z0 959 aaKnown RBP20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Ttc41Q692V3 1318 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Mmp8O70138 465 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Tbc1d5Q80XQ2 815 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Nop53Q8BK35 484 aaKnown RBP20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Ddx54Q8K4L0 874 aaKnown RBP20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 RragbQ6NTA4 374 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Iffo1Q8BXL9 562 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 ClasrpQ8CFC7 668 aa20.4■□□□□ 0.86
Col4a3bp-202ENSMUST00000109444 Arhgef6Q8K4I3 771 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 SfswapQ3USH5 945 aaKnown RBP20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ube3aO08759 870 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Hand2Q61039 217 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Skor1Q8BX46 964 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Cnot6lQ8VEG6 555 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Bcl11bQ99PV8 884 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ndufa8Q9DCJ5 172 aa20.39■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Cetn1P41209 172 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Top1Q04750 767 aaKnown RBP20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ssrp1Q08943 708 aaKnown RBP20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 GnaqP21279 359 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Chrna2Q91X60 512 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Rai14Q9EP71 979 aaKnown RBP20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Egfl6Q9JJZ5 550 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 PxdnQ3UQ28 1475 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Disp1Q3TDN0 1521 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Map7d1A2AJI0 846 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Nfxl1E9Q8I7 918 aaKnown RBP20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Hdhd2Q3UGR5 259 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 GckrQ91X44 587 aa20.38■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Erbb3Q61526 1339 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gbp8Q2V6D6 525 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Scaf1Q5U4C3 1256 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ppp6r3Q922D4 844 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 StambpQ9CQ26 424 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Lmbr1lQ9D1E5 489 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gm16486A0A1D5RMD1 1434 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gm28919A0A087WP35 240 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Epb41l2O70318 988 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gas8Q60779 478 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Tagap1P0CAX8 505 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Fgfr1opQ66JX5 399 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 AnkarA2RT91 1465 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Calm1P0DP26 149 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Calm2P0DP27 149 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Calm3P0DP28 149 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gbp1Q01514 589 aa20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 SfpqQ8VIJ6 699 aaKnown RBP20.37■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ccdc114Q3UX62 658 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Tm6sf1P58749 370 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Vps16Q920Q4 839 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Vps36Q91XD6 386 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Rlbp1Q9Z275 317 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Hmgb1P63158 215 aaKnown RBP20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Plcd1Q8R3B1 756 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Cul5Q9D5V5 780 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Mast1Q9R1L5 1570 aa20.36■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gnat2P50149 354 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Myo1bP46735 1107 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Opa1P58281 960 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Shtn1Q8K2Q9 631 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 BbxQ8VBW5 907 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Bmp2kQ91Z96 1138 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Lekr1B2RVN1 116 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ddx27Q921N6 760 aaKnown RBP20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 E9QMW4 1145 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ano6Q6P9J9 911 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Lrrc7Q80TE7 1490 aa20.35■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Zhx1P70121 873 aa20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 AmfrQ9R049 643 aa20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Stmn4P63042 189 aa20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Cacna2d4Q5RJF7 1116 aa20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Yeats4Q9CR11 227 aaKnown RBP20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gcc2Q8CHG3 1679 aa20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Gm10378F6XQQ1 160 aa20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 137.8 ms