RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Atf7Q8R0S1 413 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Klhdc4Q921I2 584 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Cux1P53564 1515 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Tmem266Q8BZB3 538 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Hs2st1Q8R3H7 356 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 GmnnO88513 206 aa17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Aimp1P31230 310 aaKnown RBP17.18■□□□□ 0.34
Chd3-201ENSMUST00000092971 Tcerg1lQ3B807 590 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Drc1Q3USS3 753 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Apol7cQ8C6E1 369 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Tekt2Q922G7 430 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 WtapQ9ER69 396 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 NpcdF8VQB8 469 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Mtmr3Q8K296 1196 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Brd3Q8K2F0 726 aaKnown RBP17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Uchl5Q9WUP7 329 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Gm28919A0A087WP35 240 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Mum1Q6DID5 682 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Ccdc38Q8CDN8 563 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Cnot6lQ8VEG6 555 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Nucb2P81117 420 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 FerP70451 823 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 Lrsam1Q80ZI6 727 aa17.17■□□□□ 0.34
Chd3-201ENSMUST00000092971 HhatQ8BMT9 499 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Bms1Q6PGF5 1284 aaKnown RBP17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Speer3W4VSP1 261 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Zap70P43404 618 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Myo1bP46735 1107 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Asic3Q6X1Y6 530 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Taok3Q8BYC6 898 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Noc2lQ9WV70 747 aaKnown RBP17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 KdrP35918 1367 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Dzip1lQ499E4 774 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Pdcd6ipQ9WU78 869 aaKnown RBP17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Myl6bQ8CI43 207 aa17.16■□□□□ 0.34
Chd3-201ENSMUST00000092971 Gucy1b3O54865 620 aa17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 Jarid2Q62315 1234 aa17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 HgsQ99LI8 775 aa17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 Top1Q04750 767 aaKnown RBP17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 DlatQ8BMF4 642 aa17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 Jmjd4Q8BFT6 427 aa17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 IbtkQ6ZPR6 1352 aaKnown RBP17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 Srgap1Q91Z69 1062 aa17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 Nop56Q9D6Z1 580 aaKnown RBP17.15■□□□□ 0.34
Chd3-201ENSMUST00000092971 Krt79Q8VED5 531 aa17.14■□□□□ 0.34
Chd3-201ENSMUST00000092971 Rbm33Q9CXK9 1231 aaKnown RBP17.14■□□□□ 0.34
Chd3-201ENSMUST00000092971 Speer4aF8VPX6 267 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 NmiO35309 314 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 U2af2P26369 475 aaKnown RBP17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Igbp1Q61249 340 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ubxn1Q922Y1 297 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cib2Q9Z309 187 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Prdm16A2A935 1275 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Slc4a4O88343 1079 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Rfc1P35601 1131 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Kif5bQ61768 963 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Tsga10Q6NY15 697 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Fermt1P59113 677 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Vps36Q91XD6 386 aa17.14■□□□□ 0.33
Chd3-201ENSMUST00000092971 Rapgef1Q3UHC1 1224 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Kif22Q3V300 660 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ppp2r5cQ60996 524 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 PicalmQ7M6Y3 660 aaKnown RBP17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Cyb5rlB1AS42 316 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ppp1r12cQ3UMT1 782 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Atp1a2Q6PIE5 1020 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ttc12Q8BW49 704 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 ScaperF8VQ70 1398 aaKnown RBP17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Stx17Q9D0I4 301 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Tbc1d8bA3KGB4 1114 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Gbp8Q2V6D6 525 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Gnat3Q3V3I2 354 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Rapgef3Q8VCC8 918 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Syap1Q9D5V6 365 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 Egfl6Q9JJZ5 550 aa17.13■□□□□ 0.33
Chd3-201ENSMUST00000092971 HellsQ60848 821 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ubac1Q8VDI7 409 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Slc12a5Q91V14 1138 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Map7d1A2AJI0 846 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Tmco4Q91WU4 631 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Diaph2O70566 1098 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Wwc1Q5SXA9 1104 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 CtcfQ61164 736 aaKnown RBP17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Ddx24Q9ESV0 857 aaKnown RBP17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 GabpaQ00422 454 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Naip1Q9QWK5 1403 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Dcaf17Q3TUL7 519 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Krt77Q6IFZ6 572 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Gm21985Q6P6P5 1106 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Vat1lQ80TB8 417 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Zbtb43Q9DAI4 467 aa17.12■□□□□ 0.33
Chd3-201ENSMUST00000092971 Wdr63B2RY71 923 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Pik3r4Q8VD65 1358 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Nip7Q9CXK8 180 aaKnown RBP17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Setdb1O88974 1307 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Izumo3A6PWV3 263 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Stac3Q8BZ71 360 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Gys2Q8VCB3 704 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Slx4ipQ9D7Y9 413 aa17.11■□□□□ 0.33
Chd3-201ENSMUST00000092971 Letm1Q9Z2I0 738 aa17.11■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms