RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Strn4P58404 760 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Gpatch11Q3UFS4 262 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Sf3b2Q3UJB0 878 aaKnown RBP8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Ripor2Q80U16 1078 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Ttc19Q8CC21 365 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Brf1Q8CFK2 676 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Nip7Q9CXK8 180 aaKnown RBP8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Rufy3Q9D394 469 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Il1rapl2Q9ERS6 686 aa8.53□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Nfatc2ipO09130 412 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Exoc5Q3TPX4 708 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Babam1Q3UI43 333 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 HellsQ60848 821 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Oxsr1Q6P9R2 527 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Slc26a8Q8R0C3 999 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Chmp3Q9CQ10 224 aa8.52□□□□□ -1.04
Clrn1-202ENSMUST00000055636 Smarce1O54941 411 aaKnown RBP8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ube2hP62257 183 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Sik1Q60670 779 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ankle2Q6P1H6 964 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Sgsm1Q8BPQ7 1093 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Q8C5K5 320 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ccdc178Q8CDV0 866 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ltb4r2Q9JJL9 360 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Stx6Q9JKK1 255 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Irx4Q9QY61 515 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Hdac6Q9Z2V5 1149 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Gm45140A0A0N4SUM8 220 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 U2af2P26369 475 aaKnown RBP8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 F2rP30558 430 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 CebpzP53569 1052 aaKnown RBP8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Snx13Q6PHS6 957 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Dcaf5Q80T85 946 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Wdr24Q8CFJ9 790 aa8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Lrrc59Q922Q8 307 aaKnown RBP8.52□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Rad50P70388 1312 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 EzrP26040 586 aaKnown RBP8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Gjb2Q00977 226 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Gm12185Q5NCB2 835 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Zbtb40Q6PCS8 1258 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ints3Q7TPD0 1041 aaKnown RBP8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Spata31d1bE9QA57 1361 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 BcorQ8CGN4 1759 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Myd88P22366 296 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Nlrp9bQ66X22 1003 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Sass6Q80UK7 654 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Miga2Q8BK03 593 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 GptQ8QZR5 496 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Med4Q9CQA5 270 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Eif3aP23116 1344 aaKnown RBP8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ubr2Q6WKZ8 1755 aa8.51□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Zhx1P70121 873 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Fam228bQ497Q6 232 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Rrs1Q9CYH6 365 aaKnown RBP8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Add3Q9QYB5 706 aaKnown RBP8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Tbc1d8Q9Z1A9 1134 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Znf326O88291 580 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Dis3l2Q8CI75 870 aaKnown RBP8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Zbtb1Q91VL9 713 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Zeb2Q9R0G7 1215 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Crb1Q8VHS2 1405 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Cct4P80315 539 aaKnown RBP8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Nucb2P81117 420 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Vgll3P85442 326 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Trim52Q8CDV4 233 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Slc5a4bQ91ZP4 660 aa8.5□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Abcc4E9Q236 1325 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Bicdl1A0JNT9 577 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Oas2E9Q9A9 742 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Anxa1P10107 346 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Trim30aP15533 496 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Usp25P57080 1055 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ddb1Q3U1J4 1140 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ddx58Q6Q899 926 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Tjp1P39447 1745 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Syt1P46096 421 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Timm10P62073 90 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 CtifQ6PEE2 600 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ankrd23Q812A3 306 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Noc3lQ8VI84 807 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Taf5lQ91WQ5 589 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Smc3Q9CW03 1217 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Mad1l1Q9WTX8 717 aaKnown RBP8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 InsrrQ9WTL4 1300 aa8.49□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Kcnh4A2A5F7 1018 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Cwc25Q9DBF7 416 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Stard3nlQ9DCI3 235 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Nfe2l3Q9WTM4 660 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Usp48Q3V0C5 1052 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Gnat3Q3V3I2 354 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Vps54Q5SPW0 977 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Tti2Q8BGV4 512 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Sf3a1Q8K4Z5 791 aaKnown RBP8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Nlrp3Q8R4B8 1033 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Add2Q9QYB8 725 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Zkscan7E9PVW1 718 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Card6E9PWH2 1175 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 DbnlQ62418 436 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Kiaa0754Q69ZZ9 979 aa8.48□□□□□ -1.05
Clrn1-202ENSMUST00000055636 Ltv1Q6NSQ7 470 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms