RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 VPS35Q96QK1 796 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 SLC35A5Q9BS91 424 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 ULBP2Q9BZM5 246 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 SUDS3Q9H7L9 328 aaPredicted RBP1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 VCPKMTQ9H867 229 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 FOLH1BQ9HBA9 442 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 SIRT7Q9NRC8 400 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 AGPAT5Q9NUQ2 364 aa1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.43□□□□□ -2.18
PTP4A2-220ENST00000627328 SMARCA2P51531 1590 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 SPAG9O60271 1321 aaKnown RBP1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 FRMPD4Q14CM0 1322 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 SLC31A2O15432 143 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 B3GAT3O94766 335 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 IGKV1D-16P01601 117 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 PNMTP11086 282 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 PGCP20142 388 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 CMA1P23946 247 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 NPY1RP25929 384 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 FMO3P31513 532 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 UBE2AP49459 152 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 PPP2R5CQ13362 524 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 ATP6AP1Q15904 470 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 ATL3Q6DD88 541 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 LRRC8BQ6P9F7 803 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 Q6ZR03 302 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 ZNF571Q7Z3V5 609 aaPredicted RBP1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 LHFPL4Q7Z7J7 247 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 KIR3DL3Q8N743 410 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 CCDC54Q8NEL0 328 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 OR10A7Q8NGE5 316 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 TESK2Q96S53 571 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 SLC6A7Q99884 636 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 POLR1EQ9GZS1 481 aaKnown RBP1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 SPNS1Q9H2V7 528 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 TM9SF3Q9HD45 589 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 SLC25A15Q9Y619 301 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 RFNGQ9Y644 331 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 NCAPD3P42695 1498 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 ERCC6Q03468 1493 aa1.42□□□□□ -2.18
PTP4A2-220ENST00000627328 IGSF9BQ9UPX0 1349 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 HMGXB3Q12766 1538 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 CLDN5O00501 218 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 PEX7O00628 323 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 B4GALT2O60909 372 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SUPT3HO75486 399 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 LGALS2P05162 132 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 H2BFMP0C1H6 154 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 RBMY1CP0DJD4 496 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 PSMC3P17980 439 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 TPSB2P20231 275 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 ATP6V1B2P21281 511 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 TBXA2RP21731 343 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 CXCR2P25025 360 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 FGF9P31371 208 aaPredicted RBP1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SHMT2P34897 504 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 LEPP41159 167 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 PTGDSP41222 190 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 VDAC2P45880 294 aaPredicted RBP1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 CUL1Q13616 776 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 TPSAB1Q15661 275 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 PARP15Q460N3 678 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 COX19Q49B96 90 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 DNLZQ5SXM8 178 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 NIPAL3Q6P499 406 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 ZNF620Q6ZNG0 422 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SHISA6Q6ZSJ9 500 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 BHLHA15Q7RTS1 189 aaPredicted RBP1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 PAQR7Q86WK9 346 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 ZDHHC21Q8IVQ6 265 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 FAM86B1Q8N7N1 296 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 OR9G1Q8NH87 305 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 ZFP90Q8TF47 636 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 RAPGEF5Q92565 580 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SEC22AQ96IW7 307 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 DEFB127Q9H1M4 99 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 DHX33Q9H6R0 707 aaKnown RBP1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SIAEQ9HAT2 523 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 WFDC1Q9HC57 220 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 YAE1D1Q9NRH1 226 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 GLRX2Q9NS18 164 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SOHLH2Q9NX45 425 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 MTRRQ9UBK8 725 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 TRAF3IP3Q9Y228 551 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 NUDCQ9Y266 331 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 ALG6Q9Y672 507 aa1.41□□□□□ -2.18
PTP4A2-220ENST00000627328 SMARCA4P51532 1647 aa1.4□□□□□ -2.18
PTP4A2-220ENST00000627328 FCGBPQ9Y6R7 5405 aaPredicted RBP1.4□□□□□ -2.18
PTP4A2-220ENST00000627328 BAZ1AQ9NRL2 1556 aaPredicted RBP1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 LAMC3Q9Y6N6 1575 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 BAZ1BQ9UIG0 1483 aaKnown RBP1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 ATAD2BQ9ULI0 1458 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 IGKV1D-8A0A087WSZ0 117 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 C7orf66A4D0T2 115 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 MBTPS2O43462 519 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 ENTPD5O75356 428 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 BCAS2O75934 225 aaPredicted RBP1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 MT-ATP6P00846 226 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 CA3P07451 260 aa1.4□□□□□ -2.19
PTP4A2-220ENST00000627328 OMGP23515 440 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms