RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PGM3O95394 542 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 CD3EP07766 207 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 SOD3P08294 240 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 ARAFP10398 606 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 ETS2P15036 469 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 IL32P24001 234 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 FKBP2P26885 142 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 RYKP34925 604 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 APOBEC1P41238 236 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 SESN3P58005 492 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 CDK6Q00534 326 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 DMTNQ08495 405 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 RBBP4Q09028 425 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 VEZF1Q14119 521 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 TAB1Q15750 504 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF311Q5JNZ3 666 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 MRPL2Q5T653 305 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC43A2Q8N370 569 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 CNOT9Q92600 299 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 MAL2Q969L2 176 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF607Q96SK3 696 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 CPPED1Q9BRF8 314 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 SPATA9Q9BWV2 254 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 POTEKPQ9BYX7 375 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 GID8Q9NWU2 228 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 CSPG4Q6UVK1 2322 aa15.55■□□□□ 0.08
SHKBP1-203ENST00000594298 LOC100653049A0A140TA62 436 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 CLDN24A6NM45 220 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 RNF223E7ERA6 249 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 FAAHO00519 579 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 KRT34O76011 436 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 NTN1O95631 604 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 YES1P07947 543 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 LSP1P33241 339 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 IDUAP35475 653 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 SEC24CP53992 1094 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 MERTKQ12866 999 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 SCARB2Q14108 478 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 TSC22D1Q15714 1073 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 CYP51A1Q16850 503 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 TRMT5Q32P41 509 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 TMEM176BQ3YBM2 270 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF672Q499Z4 452 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 RPS26P11Q5JNZ5 115 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 RNF220Q5VTB9 566 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 SEZ6L2Q6UXD5 910 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 FCRLAQ7L513 359 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 GRINAQ7Z429 371 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 VRK2Q86Y07 508 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC30A8Q8IWU4 369 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 NFKBIDQ8NI38 313 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 RP9Q8TA86 221 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 SMAP2Q8WU79 429 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 KISS1RQ969F8 398 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 COQ10BQ9H8M1 238 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 BCO1Q9HAY6 547 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 ANGPT4Q9Y264 503 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF443Q9Y2A4 671 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 FBN3Q75N90 2809 aa15.54■□□□□ 0.08
SHKBP1-203ENST00000594298 ZANQ9Y493 2812 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 CDHR4A6H8M9 788 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF814B7Z6K7 855 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 FBP2O00757 339 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 MRASO14807 208 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 CLOCKO15516 846 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 SERPINB7O75635 380 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 ADAP00813 363 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC7A1P30825 629 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 IDH2P48735 452 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 COPZ1P61923 177 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 GNGT1P63211 74 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 ITGADQ13349 1161 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 ALKBH2Q6NS38 261 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 C3orf33Q6P1S2 294 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 ZNF836Q6ZNA1 936 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 DNM1P46Q6ZS02 220 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 SNX32Q86XE0 403 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 C11orf65Q8NCR3 313 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 HIPK4Q8NE63 616 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 ATP6V1C2Q8NEY4 427 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 BHLHE22Q8NFJ8 381 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC25A43Q8WUT9 341 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 SLC35B4Q969S0 331 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 LRRC58Q96CX6 371 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 REG4Q9BYZ8 158 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 FAM107BQ9H098 131 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 IKZF5Q9H5V7 419 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 MAGED1Q9Y5V3 778 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 HEATR5AQ86XA9 2040 aa15.53■□□□□ 0.08
SHKBP1-203ENST00000594298 PRORSD1PA6NEY8 169 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 FESP07332 822 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 ENPP1P22413 925 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 CLK1P49759 484 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 MAP2K6P52564 334 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 MTPNP58546 118 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 RAC3P60763 192 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 EPS8Q12929 822 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 PGGHGQ32M88 737 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 REP15Q6BDI9 236 aa15.52■□□□□ 0.08
SHKBP1-203ENST00000594298 Q6ZT83 130 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms