RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OR2T27Q8NH04 317 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 B4GALNT2Q8NHY0 566 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 STK35Q8TDR2 534 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 GATAD2BQ8WXI9 593 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 AP3S1Q92572 193 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 HIST1H2ACQ93077 130 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 NACC2Q96BF6 587 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CTRCQ99895 268 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ZNF649Q9BS31 505 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 CDADC1Q9BWV3 514 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 ASPNQ9BXN1 380 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 KCNN2Q9H2S1 579 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 TRIM36Q9NQ86 728 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 IL20RAQ9UHF4 553 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MOKQ9UQ07 419 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 POLHQ9Y253 713 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 UGT2A1Q9Y4X1 527 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 PMF1-BGLAPU3KQ54 211 aa9.49□□□□□ -0.89
VPS25-203ENST00000589520 MAP1BP46821 2468 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 IGKV1D-42A0A075B6H8 117 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 TRAV36DV7A0A075B6V5 113 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 CCDC182A6NF36 153 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 B4E171 279 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 LOC110117498-PIK3R3F6TDL0 507 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 SOCS6O14544 535 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 OR2T1O43869 369 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 FOXD2O60548 495 aaPredicted RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 SLC25A12O75746 678 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 SNX4O95219 450 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 LDOC1O95751 146 aaPredicted RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 CD1AP06126 327 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 SBK2P0C263 348 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ASAH2BP0C7U1 165 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 CFL1P23528 166 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 ACP1P24666 158 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ITPKBP27987 946 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 TACR3P29371 465 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 TSPAN7P41732 249 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 DIO1P49895 249 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 POLR2HP52434 150 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 SLC25A1P53007 311 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ZNF117Q03924 483 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 MRPL28Q13084 256 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 CRMP1Q14194 572 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 MFSD13AQ14CX5 517 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 RGS21Q2M5E4 152 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 PAPD4Q6PIY7 484 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 PAQR6Q6TCH4 344 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 CBLN3Q6UW01 205 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 APOOLQ6UXV4 268 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 GRINAQ7Z429 371 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 LHFPL3Q86UP9 236 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 PRSS58Q8IYP2 241 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 APCDD1LQ8NCL9 501 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 BBS1Q8NFJ9 593 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 OR51G2Q8NGK0 314 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 OR5M3Q8NGP4 307 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 SLC22A8Q8TCC7 542 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ST8SIA1Q92185 356 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 OTULINQ96BN8 352 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 C1GALT1C1Q96EU7 318 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 CNTNAP3BQ96NU0 1288 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 LMF1Q96S06 567 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 MNTQ99583 582 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ZPBPQ9BS86 351 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ALG8Q9BVK2 526 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 CNTNAP3Q9BZ76 1288 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 ENKD1Q9H0I2 346 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 OR51V1Q9H2C8 321 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 MMP25Q9NPA2 562 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 TBCCD1Q9NVR7 557 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 TXNL4BQ9NX01 149 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 SF3B6Q9Y3B4 125 aaKnown RBP9.48□□□□□ -0.89
VPS25-203ENST00000589520 IER3IP1Q9Y5U9 82 aa9.48□□□□□ -0.89
VPS25-203ENST00000589520 LOC102723996A0A087X1L8 192 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 IQCMA0A1B0GVH7 501 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 C12orf71A8MTZ7 269 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 A8MVM7 634 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 C9J4A7 227 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 PLD2O14939 933 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 FLRT2O43155 660 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 CBFA2T3O75081 653 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 TRIM3O75382 744 aaPredicted RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 F8A1P23610 371 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 FKBP2P26885 142 aaKnown RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 CCKBRP32239 447 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 SOX3P41225 446 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 APOBEC1P41238 236 aaKnown RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 EFNA3P52797 238 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 BLVRAP53004 296 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 ACTA2P62736 377 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 ACTG2P63267 376 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 NDUFAF6Q330K2 333 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 CRTC2Q53ET0 693 aaPredicted RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 ALG10Q5BKT4 473 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 OR2G6Q5TZ20 316 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 PAMR1Q6UXH9 720 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 Q6ZNX1 250 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 LANCL3Q6ZV70 420 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms