RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 TCHHL1Q5QJ38 904 aaPredicted RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 KHDRBS2Q5VWX1 349 aaKnown RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 FAM219BQ5XKK7 198 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 ATG16L1Q676U5 607 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 HIST2H2AA3Q6FI13 130 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 CGB2Q6NT52 195 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 AAGABQ6PD74 315 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 USP43Q70EL4 1123 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 PLD3Q8IV08 490 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 ERI1Q8IV48 349 aaKnown RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SLC44A2Q8IWA5 706 aaPredicted RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 METTL27Q8N6F8 245 aaPredicted RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 CSNK1A1LQ8N752 337 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 AMER3Q8N944 861 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SNX31Q8N9S9 440 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SRFBP1Q8NEF9 429 aaKnown RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 OR2T11Q8NH01 316 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 GIPC3Q8TF64 312 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 RASSF5Q8WWW0 418 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 NEUROG1Q92886 237 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 C8orf44Q96CB5 159 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 CMTM7Q96FZ5 175 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 REXO5Q96IC2 774 aaKnown RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 C3orf30Q96M34 536 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 BTBD9Q96Q07 612 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 KCNA7Q96RP8 456 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 CDRT15Q96T59 188 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SERPINI1Q99574 410 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 BTBD10Q9BSF8 475 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 TMEM204Q9BSN7 226 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 TBCDQ9BTW9 1192 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 RBM38Q9H0Z9 239 aaKnown RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 KLHL31Q9H511 634 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 KCNK13Q9HB14 408 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SLCO1B3Q9NPD5 702 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 MBD2Q9UBB5 411 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 VPS29Q9UBQ0 182 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SLC7A8Q9UHI5 535 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 DAPP1Q9UN19 280 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 CDC14AQ9UNH5 594 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 SNX6Q9UNH7 406 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 TMEM5Q9Y2B1 443 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF835Q9Y2P0 537 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 WBP11Q9Y2W2 641 aaKnown RBP4.38□□□□□ -1.71
KARSP3-201ENST00000571212 ASB4Q9Y574 426 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 MAU2Q9Y6X3 613 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 HCFC1P51610 2035 aa4.38□□□□□ -1.71
KARSP3-201ENST00000571212 NF1P21359 2839 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 LOC102723996A0A087X1L8 192 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 IGHV1-45A0A0A0MS14 117 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 OR5H15A6NDH6 313 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 URADA6NGE7 173 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ANKDD1BA6NHY2 528 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ZSCAN5BA6NJL1 495 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 IDSB3KWA1 339 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SLC28A1O00337 649 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ANKRD28O15084 1053 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 BET1O15155 118 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 NDUFS4O43181 175 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SCO2O43819 266 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TBX19O60806 448 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 DNAJB6O75190 326 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ENTPD5O75356 428 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 LYPLA1O75608 230 aaPredicted RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TRMUO75648 421 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SLC35G6P0C7Q6 338 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ZCCHC18P0CG32 403 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ETS2P15036 469 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF3P17036 446 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ALOX12P18054 663 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 HIST1H1TP22492 207 aaPredicted RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ATP5A1P25705 553 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 EFNA3P52797 238 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SLC37A1P57057 533 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 NUP107P57740 925 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 VSX2P58304 361 aaPredicted RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SSTP61278 116 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 STXBP1P61764 594 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TRA2BP62995 288 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 RGS1Q08116 209 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FOXO1Q12778 655 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 RUNX2Q13950 521 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 CBFBQ13951 182 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 NPTX1Q15818 432 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 KCNJ8Q15842 424 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 C3AR1Q16581 482 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 RFTN2Q52LD8 501 aaPredicted RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 KRTCAP3Q53RY4 240 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 C6orf163Q5TEZ5 329 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAM91A1Q658Y4 838 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 CLEC6AQ6EIG7 209 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms