RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PGM3O95394 542 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 TROVE2P10155 538 aaKnown RBP eCLIP14.82□□□□□ -0.04
USB1-211ENST00000565662 PNMTP11086 282 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 PAX1P15863 534 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 HOXB9P17482 250 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 SLC6A2P23975 617 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 ADAM8P78325 824 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 NKX6-1P78426 367 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 PLAURQ03405 335 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 MFSD13AQ14CX5 517 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 PPA1Q15181 289 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 SLC2A7Q6PXP3 512 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 UBE2J2Q8N2K1 259 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 POMGNT2Q8NAT1 580 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 DNAJA4Q8WW22 397 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 FBXW5Q969U6 566 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 AURKBQ96GD4 344 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 ZNF317Q96PQ6 595 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 ZNF300Q96RE9 604 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 EBF4Q9BQW3 602 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 SLC6A13Q9NSD5 602 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 TESQ9UGI8 421 aaKnown RBP14.82□□□□□ -0.04
USB1-211ENST00000565662 ANGPT4Q9Y264 503 aa14.82□□□□□ -0.04
USB1-211ENST00000565662 TMEM72A0PK05 275 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 OR5H1A6NKK0 313 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 AP3D1O14617 1153 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 BCAS1O75363 584 aaPredicted RBP14.81□□□□□ -0.04
USB1-211ENST00000565662 AHSA1O95433 338 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 GPX2P18283 190 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 LOXP28300 417 aaPredicted RBP14.81□□□□□ -0.04
USB1-211ENST00000565662 ACAA2P42765 397 aaKnown RBP14.81□□□□□ -0.04
USB1-211ENST00000565662 CDK6Q00534 326 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 CAPRIN1Q14444 709 aaKnown RBP14.81□□□□□ -0.04
USB1-211ENST00000565662 TAB1Q15750 504 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 MAPK11Q15759 364 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 AGKQ53H12 422 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 NCMAPQ5T1S8 102 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 FAM91A1Q658Y4 838 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 DHRS4L2Q6PKH6 230 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 C6orf89Q6UWU4 347 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 TMEM108Q6UXF1 575 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 BIVMQ86UB2 503 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 VRK2Q86Y07 508 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 CADM2Q8N3J6 435 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 LSMEM1Q8N8F7 131 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 HIPK4Q8NE63 616 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 RASSF5Q8WWW0 418 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 TRIM2Q9C040 744 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 OR11A1Q9GZK7 315 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 UPB1Q9UBR1 384 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 RASD1Q9Y272 281 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 NDUFAF1Q9Y375 327 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 ITPR3Q14573 2671 aa14.81□□□□□ -0.04
USB1-211ENST00000565662 DSCAMO60469 2012 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 A0A1W2PPR1 153 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 CIB4A0PJX0 185 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 LIPT2A6NK58 231 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 AQP7P3A6NL99 342 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 ZNF814B7Z6K7 855 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 AKAP8O43823 692 aaKnown RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 EDF1O60869 148 aaKnown RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 ADAM11O75078 769 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 SLC17A1Q14916 467 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 GTDC1Q4AE62 458 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 OTUD3Q5T2D3 398 aaPredicted RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 SWT1Q5T5J6 900 aaKnown RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 INTS11Q5TA45 600 aaKnown RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 CASP12Q6UXS9 341 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 RANBP3LQ86VV4 465 aaPredicted RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 FUNDC1Q8IVP5 155 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 DEPDC4Q8N2C3 294 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 DPP10Q8N608 796 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 C11orf65Q8NCR3 313 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 MFSD8Q8NHS3 518 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 ZNF524Q96C55 264 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 TRMT61AQ96FX7 289 aaKnown RBP14.8□□□□□ -0.04
USB1-211ENST00000565662 EPYCQ99645 322 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 SH3GL1Q99961 368 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 BDH2Q9BUT1 245 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 OBP2BQ9NPH6 170 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 AMDHD2Q9Y303 409 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 FLVCR1Q9Y5Y0 555 aa14.8□□□□□ -0.04
USB1-211ENST00000565662 TRBV5-3A0A0A0MS03 114 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 ELOA3DA6NLF2 546 aaPredicted RBP14.79□□□□□ -0.04
USB1-211ENST00000565662 CCT8L1PA6NM43 557 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 LYZL6O75951 148 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 PTAFRP25105 342 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 RPS4XP62701 263 aaKnown RBP14.79□□□□□ -0.04
USB1-211ENST00000565662 FOXD4Q12950 439 aaPredicted RBP14.79□□□□□ -0.04
USB1-211ENST00000565662 SCARB2Q14108 478 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 MAPRE2Q15555 327 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 STK11Q15831 433 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 ELOA3BQ3SY89 546 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 HSP90B2PQ58FF3 399 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 C1orf140Q5VVS0 124 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 TMEM225Q6GV28 225 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 KLHL24Q6TFL4 600 aa14.79□□□□□ -0.04
USB1-211ENST00000565662 NET1Q7Z628 596 aaPredicted RBP14.79□□□□□ -0.04
USB1-211ENST00000565662 ATG4DQ86TL0 474 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms