RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 LUZP2Q86TE4 346 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 P3H2Q8IVL5 708 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 OR5K1Q8NHB7 308 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 ZPLD1Q8TCW7 415 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 SMPDL3BQ92485 455 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 TMEM41AQ96HV5 264 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 PELOQ9BRX2 385 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 ZNF350Q9GZX5 532 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 NXF5Q9H1B4 397 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 ACER3Q9NUN7 267 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 AP4B1Q9Y6B7 739 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 PRR14LQ5THK1 2151 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 C2orf72A6NCS6 295 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 AGAP5A6NIR3 686 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 SMAD7O15105 426 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 IFNW1P05000 195 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 ALPLP05186 524 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 UQCRBP14927 111 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 POLR2IP36954 125 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.83e-9■□□□□ 10.4
RABGGTA-204ENST00000558376 NPTX1Q15818 432 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 EXOC3L2Q2M3D2 409 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 ZNF836Q6ZNA1 936 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 CYP4Z1Q86W10 505 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 FAM83FQ8NEG4 500 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 POP5Q969H6 163 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 EFHD2Q96C19 240 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 Q96MF0 132 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 SECISBP2Q96T21 854 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 SPATA5L1Q9BVQ7 753 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 REEP1Q9H902 201 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 UBAP1Q9NZ09 502 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 FLRT3Q9NZU0 649 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 FAM32AQ9Y421 112 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 OR10H1Q9Y4A9 318 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 ENPP4Q9Y6X5 453 aa10.06□□□□□ -0.8
RABGGTA-204ENST00000558376 TNFRSF11BO00300 401 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 RCBTB2O95199 551 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 GNAO1P09471 354 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 GKN3PP0CG01 181 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 CYP4B1P13584 511 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 PRG2P13727 222 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 CPN1P15169 458 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 ACADSP16219 412 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 DAPP51397 102 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 TXNL4AP83876 142 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 IL1RL1Q01638 556 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 SPIBQ01892 262 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 DAG1Q14118 895 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 PRAMEF8Q5VWM4 474 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 PRAMEF7Q5VXH5 474 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 SHQ1Q6PI26 577 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 GALNT5Q7Z7M9 940 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 ADGRE4PQ86SQ3 457 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 LRRC75A-AS1Q8N1F1 130 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 ZNF619Q8N2I2 560 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 ZNF614Q8N883 585 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 OR7G1Q8NGA0 311 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 OR4C3Q8NH37 302 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 INTS12Q96CB8 462 aaKnown RBP10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 CNBD2Q96M20 576 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 PIP5K1AQ99755 562 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 G6PC3Q9BUM1 346 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 SFXN3Q9BWM7 321 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 OSBPL10Q9BXB5 764 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 PINK1Q9BXM7 581 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 SAP130Q9H0E3 1048 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 VCXQ9H320 206 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 NMNAT1Q9HAN9 279 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 CALML5Q9NZT1 146 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 ZNF443Q9Y2A4 671 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 LYVE1Q9Y5Y7 322 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 PCNX3Q9H6A9 2034 aa10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 RAI1Q7Z5J4 1906 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-204ENST00000558376 TRBV4-1A0A0J9YWV2 114 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 TRIM64A6NGJ6 449 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 TRIM64BA6NI03 449 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 A8MXE2 369 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 CASKO14936 926 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 SMPD2O60906 423 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 ACTL6AO96019 429 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 IFI6P09912 130 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 POU2F1P14859 743 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 RHCEP18577 417 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 PTGDSP41222 190 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 STARP49675 285 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 ALDH3A2P51648 485 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 EEF1A1P68104 462 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 SRYQ05066 204 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 PDZK1Q5T2W1 519 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 HLA-DQA1Q5Y7H0 255 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 PEX5LQ8IYB4 626 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 CYGBQ8WWM9 190 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 RASSF5Q8WWW0 418 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 HGDQ93099 445 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 UCN2Q96RP3 112 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 NODALQ96S42 347 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 ZNF347Q96SE7 839 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 CXorf56Q9H5V9 222 aa10.04□□□□□ -0.8
RABGGTA-204ENST00000558376 Q9N2J8 555 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms