RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ZNF813Q6ZN06 617 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 NLRC3Q7RTR2 1065 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 ST7LQ8TDW4 575 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 TECTBQ96PL2 329 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 MENTQ9BUN1 341 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 ERVK13-1Q9NX77 482 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 STMND1H3BQB6 276 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 RAB3DO95716 219 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 MAS1P04201 325 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 HMGA1P17096 107 aaKnown RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 CTSL3PQ5NE16 218 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 OR8H3Q8N146 312 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 ZBTB8AQ96BR9 441 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 LINC00615Q96LM1 132 aaPredicted RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 SEMA4CQ9C0C4 833 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 ABCG5Q9H222 651 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 ZNF281Q9Y2X9 895 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 NUBP2Q9Y5Y2 271 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 PLCH1Q4KWH8 1693 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 KDM4EB2RXH2 506 aaPredicted RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 GABARAPH6UMI1 98 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 GAPDHSO14556 408 aaPredicted RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 FANCGO15287 622 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 GABARAPO95166 117 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 NR4A2P43354 598 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 PPICP45877 212 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 RGS19P49795 217 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 RAB11AP62491 216 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 PRR22Q8IZ63 422 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 OR6F1Q8NGZ6 308 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 LGALS12Q96DT0 336 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 ZNF681Q96N22 645 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 BARHL1Q9BZE3 327 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 KCMF1Q9P0J7 381 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 GPR45Q9Y5Y3 372 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 TRAV18A0A075B6X5 111 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 NPIPA7E9PJI5 369 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 APOA2P02652 100 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 NPIPA8P0DM63 369 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 IVDP26440 423 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 SNCAP37840 140 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 FAM83FQ8NEG4 500 aaPredicted RBP11.11□□□□□ -0.63
NEK9-210ENST00000557026 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 WDR76Q9H967 626 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 LIN7BQ9HAP6 207 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 PTTG3PQ9NZH4 202 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 TMEM181Q9P2C4 612 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 GIMAP2Q9UG22 337 aa11.11□□□□□ -0.63
NEK9-210ENST00000557026 SLC5A10A0PJK1 596 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 PRAMEF27A3QJZ7 478 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CRYAAP02489 173 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 ACP2P11117 423 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 PVRP15151 417 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 AKR1C4P17516 323 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 MSR1P21757 451 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 SOX3P41225 446 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 NPSR1Q6W5P4 371 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CMTM4Q8IZR5 234 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 FAM109AQ8N4B1 249 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 SIAEQ9HAT2 523 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 BABAM2Q9NXR7 383 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 KIR2DS1A0A191URI9 304 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 BCAS1O75363 584 aaPredicted RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 PAHP00439 452 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 MAOBP27338 520 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CD1CP29017 333 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 KIR2DS4P43632 304 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CSNK1G2P78368 415 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 HTRA3P83110 453 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CHRNEQ04844 493 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 KIR2DS1Q14954 304 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 DHRS4L2Q6PKH6 230 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 USP51Q70EK9 711 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CPEB2Q7Z5Q1 589 aaKnown RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 CHDHQ8NE62 594 aaPredicted RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 RELTQ969Z4 430 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CACNG6Q9BXT2 260 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 SAP130Q9H0E3 1048 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 A0A087WV62 115 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 KIAA0513O60268 411 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 NAGAP17050 411 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 GPX3P22352 226 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 LCN6P62502 163 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 CCSAPQ6IQ19 270 aaPredicted RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 SLC37A2Q8TED4 501 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 PLATP00750 562 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CD14P08571 375 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 CYC1P08574 325 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 NID1P14543 1247 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms