RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 USP22Q9UPT9 525 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 TRAPPC4Q9Y296 219 aa10.51□□□□□ -0.73
RAB5C-204ENST00000547517 GMNCA6NCL1 334 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 LIPT2A6NK58 231 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ELOA3DA6NLF2 546 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 CCT8L1PA6NM43 557 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ZNF716A6NP11 495 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ZNF724A8MTY0 619 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 A8MVM7 634 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 FAM220BPB1ANY3 271 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 M0QX08 132 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 AIM2O14862 343 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 SNX3O60493 162 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 GCM2O75603 506 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 AHSA1O95433 338 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 GPIP06744 558 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 EDNRAP25101 427 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 PCYT1AP49585 367 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 DUSP7Q16829 419 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ELOA3BQ3SY89 546 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ALG10BQ5I7T1 473 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 OTUD3Q5T2D3 398 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 C1orf140Q5VVS0 124 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 C6orf89Q6UWU4 347 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 STAC2Q6ZMT1 411 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 GALNT5Q7Z7M9 940 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 CDH24Q86UP0 819 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 RANBP3LQ86VV4 465 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 CALHM3Q86XJ0 350 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ELOA3Q8NG57 546 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 VANGL1Q8TAA9 524 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 RNF217Q8TC41 542 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 SLC26A7Q8TE54 656 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 NRGNQ92686 78 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 WFIKKN1Q96NZ8 548 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ARHGDIGQ99819 225 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 NAA11Q9BSU3 229 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 TAPBPLQ9BX59 468 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 POTEKPQ9BYX7 375 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 TRIM2Q9C040 744 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 FANCFQ9NPI8 374 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 RASSF1Q9NS23 344 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 ADPRHL2Q9NX46 363 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 C6orf203Q9P0P8 240 aaPredicted RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 PRSS50Q9UI38 385 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 PRDM4Q9UKN5 801 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 NOSIPQ9Y314 301 aaKnown RBP10.5□□□□□ -0.73
RAB5C-204ENST00000547517 LRBAP50851 2863 aa10.5□□□□□ -0.73
RAB5C-204ENST00000547517 IGKV3D-15A0A087WSY6 115 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 CASKO14936 926 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 EIF1BO60739 113 aaKnown RBP10.49□□□□□ -0.73
RAB5C-204ENST00000547517 AKR7A3O95154 331 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 CD247P20963 164 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 PTNP21246 168 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 OR3A2P47893 321 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 NUDT2P50583 147 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 CRYBA2P53672 197 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 H3F3AP84243 136 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 DAZAP2Q15038 168 aaPredicted RBP10.49□□□□□ -0.73
RAB5C-204ENST00000547517 PDK3Q15120 406 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 OR1Q1Q15612 314 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 TSC22D1Q15714 1073 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 ERICH5Q6P6B1 374 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 PAQR6Q6TCH4 344 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 ARPINQ7Z6K5 226 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 CXorf67Q86X51 503 aaPredicted RBP10.49□□□□□ -0.73
RAB5C-204ENST00000547517 ZNF100Q8IYN0 542 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 GABRG1Q8N1C3 465 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 LSMEM1Q8N8F7 131 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 STK35Q8TDR2 534 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 DNAJA4Q8WW22 397 aaPredicted RBP10.49□□□□□ -0.73
RAB5C-204ENST00000547517 ACTR6Q9GZN1 396 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 MYLK2Q9H1R3 596 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 TMEM27Q9HBJ8 222 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 ZNF226Q9NYT6 803 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 SELENONQ9NZV5 590 aa10.49□□□□□ -0.73
RAB5C-204ENST00000547517 IGKV1D-42A0A075B6H8 117 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 A0A0B4J2E0 115 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 A0A1B0GX12 115 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 FAM221AA4D161 298 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 AQP7P3A6NL99 342 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 CPSF4LA6NMK7 179 aaKnown RBP10.48□□□□□ -0.73
RAB5C-204ENST00000547517 TPST2O60704 377 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 NPIPB7O75200 414 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 LGI1O95970 557 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 ADAP00813 363 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 IGHV3-9P01782 118 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 PNMTP11086 282 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 PSMB1P20618 241 aaKnown RBP10.48□□□□□ -0.73
RAB5C-204ENST00000547517 IL32P24001 234 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 GTF2E2P29084 291 aaKnown RBP10.48□□□□□ -0.73
RAB5C-204ENST00000547517 RPS5P46782 204 aaKnown RBP10.48□□□□□ -0.73
RAB5C-204ENST00000547517 SLC16A1P53985 500 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 EGR4Q05215 589 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 NPTX1Q15818 432 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 NRF1Q16656 503 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 LRRC23Q53EV4 343 aaPredicted RBP10.48□□□□□ -0.73
RAB5C-204ENST00000547517 FAM91A1Q658Y4 838 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 ULK3Q6PHR2 472 aa10.48□□□□□ -0.73
RAB5C-204ENST00000547517 CASP12Q6UXS9 341 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms