RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 OR52W1Q6IF63 320 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MOB3CQ70IA8 216 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TECPR1Q7Z6L1 1165 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM25Q86YD3 366 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TP53INP2Q8IXH6 220 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 OR52R1Q8NGF1 315 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 RTP3Q9BQQ7 232 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 OR52D1Q9H346 318 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TRAV27A0A087WT01 109 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 CRHBPP24387 322 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 PDZK1IP1Q13113 114 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 PGGHGQ32M88 737 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ENTPD8Q5MY95 495 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 C15orf39Q6ZRI6 1047 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM200AQ86VY9 491 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 LSMEM1Q8N8F7 131 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 NEIL2Q969S2 332 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 HHIPL1Q96JK4 782 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ENKD1Q9H0I2 346 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 EXOGQ9Y2C4 368 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 SLC22A7Q9Y694 548 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 SLC22A23A1A5C7 686 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TRAPPC2LH3BP13 241 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ARNTLO00327 626 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 HMGN2P05204 90 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF44P15621 663 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TIMP2P16035 220 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 TRA2BP62995 288 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 EEF1A1P68104 462 aaKnown RBP9.3□□□□□ -0.92
COL4A6-208ENST00000538570 GPR18Q14330 331 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 SLC35G1Q2M3R5 365 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 PODNL1Q6PEZ8 512 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 BPIFB2Q8N4F0 458 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 ACOT4Q8N9L9 421 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 OR10Z1Q8NGY1 313 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 MUL1Q969V5 352 aa9.3□□□□□ -0.92
COL4A6-208ENST00000538570 C20orf202A1L168 122 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM235A6NFC5 223 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 GABRR3A8MPY1 467 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 DHRS4L1P0CG22 281 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 INHBCP55103 352 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 KIR2DS3Q14952 304 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ACTBL2Q562R1 376 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM184AQ6ZMB5 413 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM130Q8N3G9 435 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 PGAP3Q96FM1 320 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 PAAF1Q9BRP4 392 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF286AQ9HBT8 521 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 IL26Q9NPH9 171 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TCHHQ07283 1943 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 NPIPB15A6NHN6 443 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 MSTNO14793 375 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 LILRB3O75022 631 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 GYPBP06028 91 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ADRB1P08588 477 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 POU3F2P20265 443 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 IVDP26440 423 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 CHRNB4P30926 498 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 VIPR2P41587 438 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 XCR1P46094 333 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 HSD17B7P56937 341 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 PDLIM3Q53GG5 364 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 CST9LP1Q5W188 147 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TCTE3Q8IZS6 198 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 APOOQ9BUR5 198 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ACPTQ9BZG2 426 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 DUSP22Q9NRW4 184 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 A6NIN4 97 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 AGAP14A8MT82 685 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 SLC16A7O60669 478 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 AHRP35869 848 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 EMP2P54851 167 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TNK1Q13470 666 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 MAJINQ3KP22 176 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 RAB6CQ53S08 254 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 RTP2Q5QGT7 225 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 WBP2NLQ6ICG8 309 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 C17orf107Q6ZR85 190 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 SMAP2Q8WU79 429 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 SORT1Q99523 831 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 MAP3K3Q99759 626 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 NTMT1Q9BV86 223 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TXLNGYQ9BZA5 131 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 RAB6CQ9H0N0 254 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 NIPAL2Q9H841 368 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 KCPQ6ZWJ8 1503 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 PLSCR5A0PG75 271 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 GABRPO00591 440 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 CTDSP2O14595 271 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ANGPTL7O43827 346 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 PCBD1P61457 104 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TBCEQ15813 527 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-208ENST00000538570 YIF1BQ5BJH7 314 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF789Q5FWF6 425 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 Q5PR19 223 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 DBX2Q6ZNG2 339 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 CADM3Q8N126 398 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms