RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PROCRQ9UNN8 238 aa20.25■□□□□ 0.83
SFSWAP-204ENST00000535399 CENPEQ02224 2701 aa20.25■□□□□ 0.83
SFSWAP-204ENST00000535399 LIPT2A6NK58 231 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ELOA3DA6NLF2 546 aaPredicted RBP20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 CYSRT1A8MQ03 144 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF814B7Z6K7 855 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 PNMTP11086 282 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 FPR1P21462 350 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 IDUAP35475 653 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 SLC35A1P78382 337 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 EGR4Q05215 589 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ELOA3BQ3SY89 546 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ALG10BQ5I7T1 473 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 C1orf140Q5VVS0 124 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF610Q8N9Z0 462 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ELOA3Q8NG57 546 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 PROX1Q92786 737 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 SLC38A4Q969I6 547 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 ZHX1-C8orf76Q96EF9 292 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 KCTD14Q9BQ13 255 aaPredicted RBP20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 PCDHAC1Q9H158 963 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 BCO1Q9HAY6 547 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 GALNT8Q9NY28 637 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 HCFC1P51610 2035 aa20.24■□□□□ 0.83
SFSWAP-204ENST00000535399 IGKV1D-42A0A075B6H8 117 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 CXCR6O00574 342 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 RAMP1O60894 148 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 YES1P07947 543 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 TNFRSF1BP20333 461 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 SLC25A3Q00325 362 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 RASGEF1BQ0VAM2 473 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 CEACAM7Q14002 265 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF613Q6PF04 617 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 NUFIP2Q7Z417 695 aaKnown RBP20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 TSPYL5Q86VY4 417 aaPredicted RBP20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 CARM1Q86X55 608 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 PGAM4Q8N0Y7 254 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 BCAS4Q8TDM0 211 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 SLC47A1Q96FL8 570 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 PTDSS2Q9BVG9 487 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 ADA2Q9NZK5 511 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 SLC9A8Q9Y2E8 581 aa20.23■□□□□ 0.83
SFSWAP-204ENST00000535399 A0A087WUJ7 227 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 EIF1BO60739 113 aaKnown RBP20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 LYPD3O95274 346 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 GPIP06744 558 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 CDH12P55289 794 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 SNTB1Q13884 538 aaKnown RBP20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 PDK3Q15120 406 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 OR7A5Q15622 319 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 ENTPD8Q5MY95 495 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 TMEM201Q5SNT2 666 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 SWT1Q5T5J6 900 aaKnown RBP20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 CRYBG3Q68DQ2 2970 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 PAQR6Q6TCH4 344 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 CCDC103Q8IW40 242 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF295-AS1Q8N0V1 137 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 KTI12Q96EK9 354 aaPredicted RBP20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF300Q96RE9 604 aaPredicted RBP20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 TACO1Q9BSH4 297 aaKnown RBP20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 SELENONQ9NZV5 590 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 SH3GLB1Q9Y371 365 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 CELSR2Q9HCU4 2923 aa20.22■□□□□ 0.83
SFSWAP-204ENST00000535399 IGKV3D-15A0A087WSY6 115 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 CPSF4LA6NMK7 179 aaKnown RBP20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF716A6NP11 495 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 ZNF724A8MTY0 619 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 GSTA4O15217 222 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 THY1P04216 161 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 PCYT1AP49585 367 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 SELENOWP63302 87 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 SORDQ00796 357 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 KIF18BQ86Y91 864 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 PIGXQ8TBF5 258 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 NSL1Q96IY1 281 aa20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 NAA11Q9BSU3 229 aaPredicted RBP20.21■□□□□ 0.83
SFSWAP-204ENST00000535399 ANKHD1Q8IWZ3 2542 aaKnown RBP20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 FTCDNL1E5RQL4 147 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 FZD7O75084 574 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 AHSA1O95433 338 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 PRF1P14222 555 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 GGT1P19440 569 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 CPOXP36551 454 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 PEX19P40855 299 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 SLC16A1P53985 500 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 FAM27E3Q08E93 113 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 P3H2Q8IVL5 708 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 RNF148Q8N7C7 305 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 MFSD8Q8NHS3 518 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 RNF217Q8TC41 542 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 ADAMTS16Q8TE57 1224 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 ZNF775Q96BV0 537 aaPredicted RBP20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 TPD52L3Q96J77 140 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 TAPBPLQ9BX59 468 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 C12orf49Q9H741 205 aa20.2■□□□□ 0.82
SFSWAP-204ENST00000535399 TRAPPC13A5PLN9 417 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 CHP2O43745 196 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 AKR7A3O95154 331 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 T-ENOLP0DO92 83 aa20.19■□□□□ 0.82
SFSWAP-204ENST00000535399 NCK1P16333 377 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms