RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CGB2Q6NT52 195 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 GALNT5Q7Z7M9 940 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 CADM2Q8N3J6 435 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 STEAP2Q8NFT2 490 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 OR52E4Q8NGH9 312 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 DYDC1Q8WWB3 177 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF385AQ96PM9 386 aaKnown RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 CPPED1Q9BRF8 314 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 HDHD5Q9BXW7 423 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 NPHS2Q9NP85 383 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 SEC14L4Q9UDX3 406 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 FLVCR1Q9Y5Y0 555 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 GMEB1Q9Y692 573 aa11.12□□□□□ -0.63
HSPG2-212ENST00000493940 FN1P02751 2386 aaKnown RBP11.12□□□□□ -0.63
HSPG2-212ENST00000493940 A0A1W2PP18 115 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 PDLIM1O00151 329 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 ITGA5P08648 1049 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 GPX2P18283 190 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 NCF2P19878 526 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-212ENST00000493940 IL32P24001 234 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 HTR2AP28223 471 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 HTR3AP46098 478 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 STX1BP61266 288 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 P2RY6Q15077 328 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 OR7A5Q15622 319 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 TSPO2Q5TGU0 170 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 C9orf135Q5VTT2 229 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 WBP2NLQ6ICG8 309 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 PTOV1Q86YD1 416 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 P3H2Q8IVL5 708 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF100Q8IYN0 542 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 GOLGA6L1Q8N7Z2 621 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 AKAP1Q92667 903 aaKnown RBP eCLIP11.11□□□□□ -0.63
HSPG2-212ENST00000493940 KISS1RQ969F8 398 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-212ENST00000493940 PTDSS2Q9BVG9 487 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 POTEKPQ9BYX7 375 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 SLC7A10Q9NS82 523 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 CALML5Q9NZT1 146 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 EDARQ9UNE0 448 aa11.11□□□□□ -0.63
HSPG2-212ENST00000493940 NOSIPQ9Y314 301 aaKnown RBP11.11□□□□□ -0.63
HSPG2-212ENST00000493940 SPIN1Q9Y657 262 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-212ENST00000493940 FTCDNL1E5RQL4 147 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 FBP2O00757 339 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 HS3ST1O14792 307 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 CXCR1P25024 350 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 SLC35A1P78382 337 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 SLC25A3Q00325 362 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 CDK6Q00534 326 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 BSPH1Q075Z2 132 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 DMTNQ08495 405 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 FAPQ12884 760 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 FADDQ13158 208 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 GNA13Q14344 377 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 SQLEQ14534 574 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 STK11Q15831 433 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 OTUD3Q5T2D3 398 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-212ENST00000493940 FBXW9Q5XUX1 488 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 LINGO2Q7L985 606 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF440Q8IYI8 595 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 KDM8Q8N371 416 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 WDR31Q8NA23 367 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 KBTBD8Q8NFY9 601 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 HSD17B8Q92506 261 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 DDIT4LQ96D03 193 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 KTI12Q96EK9 354 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-212ENST00000493940 PERPQ96FX8 193 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 CCL19Q99731 98 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 PIP5K1AQ99755 562 aa11.1□□□□□ -0.63
HSPG2-212ENST00000493940 TACO1Q9BSH4 297 aaKnown RBP11.1□□□□□ -0.63
HSPG2-212ENST00000493940 IGKV1D-42A0A075B6H8 117 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 OR5H1A6NKK0 313 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 DNPH1O43598 174 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 RAD51DO75771 328 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 CD8AP01732 235 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 SOD3P08294 240 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 DANCRP0C864 163 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 PTNP21246 168 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 AQP1P29972 269 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 IDUAP35475 653 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 GZMMP51124 257 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 MTPNP58546 118 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 LTBQ06643 244 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 SPOCK1Q08629 439 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 CAPRIN1Q14444 709 aaKnown RBP11.09□□□□□ -0.63
HSPG2-212ENST00000493940 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
HSPG2-212ENST00000493940 GABRA6Q16445 453 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 GCNT6Q5T4J0 391 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 C1orf140Q5VVS0 124 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 PRAMEF8Q5VWM4 474 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 PRAMEF7Q5VXH5 474 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 PAQR6Q6TCH4 344 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-212ENST00000493940 TSPYL5Q86VY4 417 aaPredicted RBP11.09□□□□□ -0.63
HSPG2-212ENST00000493940 WDFY1Q8IWB7 410 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 ZNF611Q8N823 705 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 OR4D11Q8NGI4 311 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 BBS10Q8TAM1 723 aa11.09□□□□□ -0.63
HSPG2-212ENST00000493940 PIGXQ8TBF5 258 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms