RNA–Protein interactions for RNA: ENST00000467464.1

PTPRF-211, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-211ENST00000467464 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.73
PTPRF-211ENST00000467464 FAM234BA2RU67 622 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 LIPT2A6NK58 231 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 FAM171A2A8MVW0 826 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 TMEM229AB2RXF0 380 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 EIF1BO60739 113 aaKnown RBP10.52□□□□□ -0.73
PTPRF-211ENST00000467464 FZD7O75084 574 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 NPIPB7O75200 414 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 NDUFS7O75251 213 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 RAD51DO75771 328 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 CDKN1AP38936 164 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 CRATP43155 626 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 MAP2K6P52564 334 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 CRISP3P54108 245 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 SLC35A1P78382 337 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 TNK1Q13470 666 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 GNA13Q14344 377 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 RGNQ15493 299 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 GABRA6Q16445 453 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 TSPO2Q5TGU0 170 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 AGBL2Q5U5Z8 902 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 SLC2A7Q6PXP3 512 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 B3GLCTQ6Y288 498 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 ZNF440Q8IYI8 595 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 TMEM45BQ96B21 275 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 C3orf49Q96BT1 292 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 C7orf26Q96N11 449 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 MUS81Q96NY9 551 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 RMND5AQ9H871 391 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 SLCO1B3Q9NPD5 702 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 SLC7A10Q9NS82 523 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 ASB6Q9NWX5 421 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 TAS2R16Q9NYV7 291 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 CALML5Q9NZT1 146 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 PRDM4Q9UKN5 801 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 ZANQ9Y493 2812 aa10.52□□□□□ -0.73
PTPRF-211ENST00000467464 HEATR5AQ86XA9 2040 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 NUP214P35658 2090 aaPredicted RBP10.51□□□□□ -0.73
PTPRF-211ENST00000467464 TRBV5-3A0A0A0MS03 114 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 A0A0G2JPF8 293 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 A0A1W2PR80 420 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 AQP7P3A6NL99 342 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 HNRNPCL2B2RXH8 293 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 HNRNPCL3B7ZW38 293 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 FRS3O43559 492 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 HNRNPCL1O60812 293 aaKnown RBP10.51□□□□□ -0.73
PTPRF-211ENST00000467464 MRPL33O75394 65 aaKnown RBP10.51□□□□□ -0.73
PTPRF-211ENST00000467464 ERLIN1O75477 346 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 IGHV4-39P01824 125 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 HNRNPCL4P0DMR1 293 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 IDUAP35475 653 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 CDH11P55287 796 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 FAPQ12884 760 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 BNIP2Q12982 314 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 CEACAM7Q14002 265 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 LRIF1Q5T3J3 769 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 C11orf71Q6IPW1 123 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 CASP12Q6UXS9 341 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 SSX8Q7RTT4 187 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 SERPINA11Q86U17 422 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 COMTD1Q86VU5 262 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 UBE2J2Q8N2K1 259 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 MIER2Q8N344 545 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 TMEM99Q8N816 258 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 OR52N5Q8NH56 324 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 MAL2Q969L2 176 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 MUCL1Q96DR8 90 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 BOD1Q96IK1 185 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 ZNF385AQ96PM9 386 aaKnown RBP10.51□□□□□ -0.73
PTPRF-211ENST00000467464 EBF4Q9BQW3 602 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 SPATA9Q9BWV2 254 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 BCL2L10Q9HD36 194 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 A4GALTQ9NPC4 353 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 CISD1Q9NZ45 108 aaKnown RBP10.51□□□□□ -0.73
PTPRF-211ENST00000467464 DCTN4Q9UJW0 460 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 SLC9A8Q9Y2E8 581 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 GMEB1Q9Y692 573 aa10.51□□□□□ -0.73
PTPRF-211ENST00000467464 A0A096LPI6 279 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 A0A1W2PP18 115 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 FTCDNL1E5RQL4 147 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 E7EQL1 145 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 CLIC1O00299 241 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 ABCD4O14678 606 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 AKR7A3O95154 331 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 TGDSO95455 350 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 ANP32DO95626 131 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 IDH3AP50213 366 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 HOXC5Q00444 222 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 EGR4Q05215 589 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 OR7A5Q15622 319 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 CLEC12BQ2HXU8 276 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 TTMPQ5BVD1 217 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 C6orf10Q5SRN2 563 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 OTUD3Q5T2D3 398 aaPredicted RBP10.5□□□□□ -0.73
PTPRF-211ENST00000467464 PRAMEF8Q5VWM4 474 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 PRAMEF7Q5VXH5 474 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 WBP2NLQ6ICG8 309 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
PTPRF-211ENST00000467464 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms