RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 CBFBQ13951 182 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 RAB33AQ14088 237 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 CDK5R1Q15078 307 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 ZCCHC12Q6PEW1 402 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 OR52L1Q8NGH7 329 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 SMPDL3BQ92485 455 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 SCLYQ96I15 445 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 MS4A8Q9BY19 250 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 FAM117AQ9C073 453 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 C8orf33Q9H7E9 229 aaPredicted RBP13.02□□□□□ -0.32
TOP3B-214ENST00000457270 CMC2Q9NRP2 79 aa13.02□□□□□ -0.32
TOP3B-214ENST00000457270 LRIT2A6NDA9 550 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 UNC119BA6NIH7 251 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 ZNF879B4DU55 563 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 H7C4K7 107 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 PRKRAO75569 313 aaKnown RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 LY86O95711 162 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 HEXAP06865 529 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 ACHEP22303 614 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 FXYD6P3P58550 94 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 ZNF345Q14585 488 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 TMEM69Q5SWH9 247 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 NAA40Q86UY6 237 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 VRK2Q86Y07 508 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 MUC20Q8N307 709 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 KCNRGQ8N5I3 272 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 SFXN5Q8TD22 340 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 SPSB2Q99619 263 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 GFI1Q99684 422 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 SLC38A1Q9H2H9 487 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 POLE3Q9NRF9 147 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 CARHSP1Q9Y2V2 147 aaKnown RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 TRAV14DV4A0A0A6YYC5 116 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 GPR37O15354 613 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 SLC2A5P22732 501 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 PPIAP62937 165 aaKnown RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 EIF2S3LQ2VIR3 472 aaKnown RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 LRRC73Q5JTD7 316 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 FCRLAQ7L513 359 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 SKA3Q8IX90 412 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 LMNTD1Q8N9Z9 388 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 F2RL3Q96RI0 385 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 UCK1Q9HA47 277 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 SEBOXQ9HB31 216 aaPredicted RBP13.02□□□□□ -0.33
TOP3B-214ENST00000457270 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
TOP3B-214ENST00000457270 TMEM272A0A1B0GTI8 110 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 CXorf51AA0A1B0GTR3 108 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 FAM86C2PA6NEL3 165 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 C5orf52A6NGY3 159 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 UBE2CO00762 179 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 ICOSLGO75144 302 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 PAK4O96013 591 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-214ENST00000457270 ADCYAP1P18509 176 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 BLOC1S1P78537 153 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 SMAD3P84022 425 aaKnown RBP13.01□□□□□ -0.33
TOP3B-214ENST00000457270 LMAN2Q12907 356 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 HABP2Q14520 560 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-214ENST00000457270 JMJD6Q6NYC1 403 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-214ENST00000457270 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-214ENST00000457270 C1orf216Q8TAB5 229 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 SLC25A28Q96A46 364 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 MCHR1Q99705 422 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 LHX9Q9NQ69 397 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 ARGFXA6NJG6 315 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 TMPRSS11DO60235 418 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 IL9P15248 144 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 SRMP19623 302 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 POU4F2Q12837 409 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 LDLRAD1Q5T700 205 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 PWWP2BQ6NUJ5 590 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 H3F3CQ6NXT2 135 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 LCTLQ6UWM7 567 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 Q6ZNB5 142 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 SSX9Q7RTT3 188 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 OR2W3Q7Z3T1 314 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 ZNF546Q86UE3 836 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 NUDT13Q86X67 352 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 OR6N1Q8NGY5 312 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-214ENST00000457270 TMEM41AQ96HV5 264 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 OR14A2Q96R54 314 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
TOP3B-214ENST00000457270 MTCL1Q9Y4B5 1905 aaKnown RBP13□□□□□ -0.33
TOP3B-214ENST00000457270 CALCBP10092 127 aa13□□□□□ -0.33
TOP3B-214ENST00000457270 RGS8P57771 180 aaPredicted RBP13□□□□□ -0.33
TOP3B-214ENST00000457270 RELQ04864 619 aaPredicted RBP13□□□□□ -0.33
TOP3B-214ENST00000457270 PRAMEF14Q5SWL7 426 aa13□□□□□ -0.33
TOP3B-214ENST00000457270 SSX6Q7RTT6 188 aa13□□□□□ -0.33
TOP3B-214ENST00000457270 SYS1Q8N2H4 156 aa13□□□□□ -0.33
TOP3B-214ENST00000457270 CHST14Q8NCH0 376 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms