RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SYNDIG1LA6NDD5 238 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 TNFSF11O14788 317 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 POLR3GO15318 223 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 CDH16O75309 829 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 UGT2B11O75310 529 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 YES1P07947 543 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 INAFM2P0DMQ5 153 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 NPR2P20594 1047 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 COX5AP20674 150 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 ABCD3P28288 659 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 IMPA1P29218 277 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 S100A5P33763 92 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 GJC1P36383 396 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 ALDH3B1P43353 468 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 OR3A2P47893 321 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 NPY2RP49146 381 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 LIM2P55344 173 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 DSCR4P56555 118 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 POLR2FP61218 127 aaKnown RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 TBPL1P62380 186 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 TUBA1BP68363 451 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 PAX8Q06710 450 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 KCNJ11Q14654 390 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 LGSNQ5TDP6 509 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 C9orf135Q5VTT2 229 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 SUMO4Q6EEV6 95 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 THOC7Q6I9Y2 204 aaKnown RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 SLC2A7Q6PXP3 512 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 MUC20Q8N307 709 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 PAPD5Q8NDF8 572 aaKnown RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 OR4K17Q8NGC6 315 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 ACMSDQ8TDX5 336 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 KCNJ9Q92806 393 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 OSTF1Q92882 214 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 SPDL1Q96EA4 605 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 FAM71F1Q96KD3 344 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 PANX2Q96RD6 677 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 TBCDQ9BTW9 1192 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 BRINP2Q9C0B6 783 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 BATF3Q9NR55 127 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 SNX15Q9NRS6 342 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 ARGLU1Q9NWB6 273 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 MED11Q9P086 117 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 KLHL8Q9P2G9 620 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 CARD8Q9Y2G2 431 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 NOSIPQ9Y314 301 aaKnown RBP4.07□□□□□ -1.76
SDCBP-205ENST00000447267 WIPI2Q9Y4P8 454 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 TIMM22Q9Y584 194 aa4.07□□□□□ -1.76
SDCBP-205ENST00000447267 SRRM2Q9UQ35 2752 aaKnown RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 DOCK11Q5JSL3 2073 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PPIAL4EA0A075B759 164 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PPIAL4CA0A0B4J2A2 164 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 IGHV1-18A0A0C4DH31 117 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 A0A0J9YW62 118 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 C3orf70A6NLC5 250 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 WASHC1A8K0Z3 465 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PRSS47A8MTI9 375 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 TRIM49D1C9J1S8 452 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PRR23D1E9PI22 279 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PPIAL4DF5H284 164 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 FGF17O60258 216 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 KERAO60938 352 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 FTLP02792 175 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 F7P08709 466 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PRR23D2P0DMB1 279 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PPIAL4FP0DN26 164 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ATP5DP30049 168 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 CALCRP30988 508 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 HSD17B2P37059 387 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 MAGEA1P43355 309 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 IER3P46695 156 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 STT3AP46977 705 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 FOXA1P55317 472 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 UBASH3AP57075 661 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 TAS2R40P59535 323 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 SEC61A1P61619 476 aaKnown RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PHEXP78562 749 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 CUL3Q13618 768 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 SERTAD2Q14140 314 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 MAD2L1BPQ15013 274 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PDK2Q15119 407 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 GABRA6Q16445 453 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ARL13AQ5H913 290 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 SLC18B1Q6NT16 456 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ANKRD16Q6P6B7 361 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 GDPGP1Q6ZNW5 385 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ZNF534Q76KX8 674 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 SSX8Q7RTT4 187 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 NUP54Q7Z3B4 507 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 SNX32Q86XE0 403 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 UBE2J2Q8N2K1 259 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 C17orf53Q8N3J3 647 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 LINC00469Q8N7U9 141 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 ZBTB8BQ8NAP8 495 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-205ENST00000447267 KCTD6Q8NC69 237 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 BBOF1Q8ND07 529 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 OR4K1Q8NGD4 311 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 OR13J1Q8NGT2 312 aa4.06□□□□□ -1.76
SDCBP-205ENST00000447267 PPP1R35Q8TAP8 253 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms