RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SFXN5Q8TD22 340 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 MSLNLQ96KJ4 702 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 BRF2Q9HAW0 419 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 MMP26Q9NRE1 261 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 SLC6A14Q9UN76 642 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 SLC35A3Q9Y2D2 325 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 A0A0B4J203 849 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 PQLC2LA1A4F0 135 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 WNT10BO00744 389 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 GRM6O15303 877 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 HCRTR2O43614 444 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 QDPRP09417 244 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 CXCL3P19876 107 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 ELAVL4P26378 380 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 HTR2CP28335 458 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 HTD2P86397 168 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 TLE3Q04726 772 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 GLO1Q04760 184 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 GAB1Q13480 694 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 RIN1Q13671 783 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 NKG7Q16617 165 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 CST9LP1Q5W188 147 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 TRNP1Q6NT89 227 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 FIP1L1Q6UN15 594 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 LURAP1LQ8IV03 231 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 REM2Q8IYK8 340 aaPredicted RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 OR5M1Q8NGP8 315 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 FUBP3Q96I24 572 aaKnown RBP eCLIP9.63□□□□□ -0.874e-12■■■■■ 27.5
LIN54-202ENST00000442461 TGM7Q96PF1 710 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 SLC12A9Q9BXP2 914 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 POFUT1Q9H488 388 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 TNFRSF12AQ9NP84 129 aa9.63□□□□□ -0.87
LIN54-202ENST00000442461 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
LIN54-202ENST00000442461 M0QZK8 103 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 KDELR3O43731 214 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 GGCTO75223 188 aaKnown RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 ICAM2P13598 275 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 FGF9P31371 208 aaPredicted RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 AKT2P31751 481 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 HYAL4Q2M3T9 481 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 PYCR3Q53H96 274 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 MDGA2Q7Z553 956 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 BAGE3Q86Y29 109 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 BAGE2Q86Y30 109 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TMEM130Q8N3G9 435 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 OR13C3Q8NGS6 347 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 ZNF461Q8TAF7 563 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 SLC25A31Q9H0C2 315 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 ACER3Q9NUN7 267 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 SLC25A37Q9NYZ2 338 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 NUMA1Q14980 2115 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TRBV23-1A0A0A0MS06 115 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 A8MXE2 369 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TARM1B6A8C7 271 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 CLDN4O14493 209 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 FRS3O43559 492 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TLX3O43711 291 aaPredicted RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 KLF8O95600 359 aaPredicted RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 SOD1P00441 154 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 MMP3P08254 477 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 ACRV1P26436 265 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TACR3P29371 465 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 MAP2K5Q13163 448 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 AMZ1Q400G9 498 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TIGD5Q53EQ6 642 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TECPR1Q7Z6L1 1165 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 PIANPQ8IYJ0 282 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 DVL3Q92997 716 aaPredicted RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 ZNF559Q9BR84 538 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 CABLES2Q9BTV7 478 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 PARP12Q9H0J9 701 aaKnown RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 IKZF5Q9H5V7 419 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 NOX4Q9NPH5 578 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 MMP24Q9Y5R2 645 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 MFSD2BA6NFX1 497 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 ADAM11O75078 769 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 PRSS23O95084 383 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 PAPLNO95428 1278 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 GYPBP06028 91 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 CRYBB2P43320 205 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 CDKN1CP49918 316 aaPredicted RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 ZNF84P51523 738 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 MRPS6P82932 125 aaKnown RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 OR7A5Q15622 319 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 SSX1Q16384 188 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TAF9Q16594 264 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 FCRLBQ6BAA4 426 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 FAM109BQ6ICB4 259 aaPredicted RBP9.62□□□□□ -0.87
LIN54-202ENST00000442461 OPN5Q6U736 354 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 SULF2Q8IWU5 870 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 GALNT16Q8N428 558 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 SUSD6Q92537 303 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 RBP7Q96R05 134 aa9.62□□□□□ -0.87
LIN54-202ENST00000442461 ORAI3Q9BRQ5 295 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms