RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ZWINTO95229 277 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 AIFM1O95831 613 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 IGHEP01854 428 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 KRT6AP02538 564 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 KRT6BP04259 564 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 PRB1P04280 392 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 KLK1P06870 262 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 NEFHP12036 1026 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 COX6A1P12074 109 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 BGNP21810 368 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 HIST1H1TP22492 207 aaPredicted RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 CPN2P22792 545 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 JAK1P23458 1154 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ITGA3P26006 1051 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ABCD3P28288 659 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 PPP2R1BP30154 601 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 BSGP35613 385 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 KRT6CP48668 564 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 CCL11P51671 97 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 LIM2P55344 173 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 EEF1A1P68104 462 aaKnown RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 TNFRSF17Q02223 184 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ASPHQ12797 758 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 CSTF3Q12996 717 aaKnown RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 SLAMF1Q13291 335 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 CUL3Q13618 768 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 IMPG1Q17R60 797 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 SFT2D3Q587I9 215 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 PDSS1Q5T2R2 415 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 AGBL2Q5U5Z8 902 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 EEF1A1P5Q5VTE0 462 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 HHATQ5VTY9 493 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 C18orf63Q68DL7 685 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 SIGIRRQ6IA17 410 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 OR4C11Q6IEV9 310 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 NIPAL1Q6NVV3 410 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 CYP20A1Q6UW02 462 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 COMMD6Q7Z4G1 85 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ANKRD37Q7Z713 158 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 EPHX4Q8IUS5 362 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 NUDCD3Q8IVD9 361 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 BEST3Q8N1M1 668 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 C1orf52Q8N6N3 182 aaKnown RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 CDC26Q8NHZ8 85 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 APOBEC4Q8WW27 367 aaKnown RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 METTL21AQ8WXB1 218 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 UCN3Q969E3 161 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ATP6V1G3Q96LB4 118 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 PPP1R36Q96LQ0 422 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 CATSPER2Q96P56 530 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 SERPINI1Q99574 410 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 TBCDQ9BTW9 1192 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ING2Q9H160 280 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 SEBOXQ9HB31 216 aaPredicted RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 SCRT2Q9NQ03 307 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 PRTFDC1Q9NRG1 225 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ZNF446Q9NWS9 450 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 TEX10Q9NXF1 929 aaPredicted RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 NKIRAS1Q9NYS0 192 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 GIMAP2Q9UG22 337 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 CAMK2AQ9UQM7 478 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 MRPS33Q9Y291 106 aaKnown RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 TP53TG5Q9Y2B4 290 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 ATG4BQ9Y4P1 393 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 MYO18BQ8IUG5 2567 aa3.98□□□□□ -1.77
PMS1-202ENST00000374826 NCOA6Q14686 2063 aaPredicted RBP3.98□□□□□ -1.77
PMS1-202ENST00000374826 HCFC1P51610 2035 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 SMG1Q96Q15 3661 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 SPTAN1Q13813 2472 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 LOC102723996A0A087X1L8 192 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 IGKV3D-11A0A0A0MRZ8 115 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 IGHV1-45A0A0A0MS14 117 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 NSG1A0A0A6YYJ2 146 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 GNG14A0A1W2PPG7 69 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 WASHC1A8K0Z3 465 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 TMEM114B3SHH9 223 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 MKRN2OSH3BPM6 223 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 K7EM74 188 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 BIRC5O15392 142 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 PCDH7O60245 1069 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 ZG16O60844 167 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 HSPA4LO95757 839 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 HPP00738 406 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 SERPINE1P05121 402 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 PRSS1P07477 247 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 IL3P08700 152 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 FAM58BPP0C7Q3 252 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 LINC00032P0C843 101 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 UROSP10746 265 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 TIA1P31483 386 aaKnown RBP eCLIP3.97□□□□□ -1.77
PMS1-202ENST00000374826 HOXA1P49639 335 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 MAPK12P53778 367 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 OR4D2P58180 307 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 KRTAP10-3P60369 221 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 ABCE1P61221 599 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 NAA20P61599 178 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 RPL38P63173 70 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 FOLH1Q04609 750 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms