RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 FKBP3Q00688 224 aaKnown RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 FUT7Q11130 342 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 NFATC2Q13469 925 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 DPYSQ14117 519 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF146Q15072 292 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 MS4A18Q3C1V0 323 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 ADAM5Q6NVV9 412 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 Q6ZTC4 211 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 AMZ2Q86W34 360 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 DEFB106AQ8N104 65 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 MLKLQ8NB16 471 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 Q8NBF4 154 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR1K1Q8NGR3 316 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR4F5Q8NH21 305 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 WDR36Q8NI36 951 aaKnown RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 CCDC110Q8TBZ0 833 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 LMX1AQ8TE12 382 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 CEP192Q8TEP8 1941 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 GTF3AQ92664 365 aaKnown RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 NABP1Q96AH0 204 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 RPRD1AQ96P16 312 aaPredicted RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 TEP1Q99973 2627 aaKnown RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 SYT11Q9BT88 431 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 LRRC61Q9BV99 259 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 POPDC2Q9HBU9 364 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 DEPPQ9NTK1 212 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 NUDT4Q9NZJ9 180 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 VANGL2Q9ULK5 521 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF175Q9Y473 711 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 CENPEQ02224 2701 aa4.59□□□□□ -1.68
RNU4-39P-201ENST00000362455 ITPR2Q14571 2701 aa4.59□□□□□ -1.68
RNU4-39P-201ENST00000362455 SYNJ2BP-COX16A0A087WUM0 186 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ARHGEF33A8MVX0 844 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 K7EPI3 171 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 CETN3O15182 167 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 NVLO15381 856 aaKnown RBP4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 CLDN11O75508 207 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 APOEP02649 317 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ADRB3P13945 408 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 SYKP43405 635 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 SLC1A6P48664 564 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 IRX1P78414 480 aaPredicted RBP4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZFP36L1Q07352 338 aaKnown RBP4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 PNOCQ13519 176 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 FASTKQ14296 549 aaKnown RBP4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 HAGHQ16775 308 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 HKDC1Q2TB90 917 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 TCHHL1Q5QJ38 904 aaPredicted RBP4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZC2HC1BQ5TFG8 222 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 C22orf39Q6P5X5 142 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 PARGQ86W56 976 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ARL14Q8N4G2 192 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 TEX9Q8N6V9 391 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ATP6V0D2Q8N8Y2 350 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 BANPQ8N9N5 519 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 FBXO25Q8TCJ0 367 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 SSC4DQ8WTU2 575 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF606Q8WXB4 792 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 NT5C3BQ969T7 300 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 CPXM1Q96SM3 734 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 MCRIP2Q9BUT9 160 aaKnown RBP4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 POLE3Q9NRF9 147 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 DDIT4Q9NX09 232 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 THYN1Q9P016 225 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 COX16Q9P0S2 106 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 MDFICQ9P1T7 246 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 BCAP29Q9UHQ4 241 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 SHROOM3Q8TF72 1996 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 LRBAP50851 2863 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 PLXNA2O75051 1894 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 CSMD1Q96PZ7 3565 aa4.58□□□□□ -1.68
RNU4-39P-201ENST00000362455 IGLV3-10A0A075B6K4 115 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 D6RAR5 112 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 K7EQG2 157 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 SOCS3O14543 225 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 STX10O60499 249 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 SMPD2O60906 423 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 IFNB1P01574 187 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 EPB41P11171 864 aaKnown RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCL4P13236 92 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCR1P32246 355 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 CDH4P55283 916 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 NDUFV3P56181 108 aaKnown RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 YWHAEP62258 255 aaKnown RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 RPS21P63220 83 aaKnown RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 SRPXP78539 464 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 NUCB2P80303 420 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZKSCAN8Q15776 578 aaPredicted RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 UNC50Q53HI1 259 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 CARD16Q5EG05 197 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 RABGAP1LQ5R372 815 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 MUC21Q5SSG8 566 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 OTUD3Q5T2D3 398 aaPredicted RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 GFI1BQ5VTD9 330 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 ATL3Q6DD88 541 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 RHBDD2Q6NTF9 364 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 DPY19L2P2Q6ZN68 376 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 FAM183BPQ6ZVS7 135 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 FAM131BQ86XD5 332 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 DCAF4L2Q8NA75 395 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms