RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 CD1CP29017 333 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 S100A7P31151 101 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 CEBPGP53567 150 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 MAT1AQ00266 395 aaKnown RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 DNASE1L3Q13609 305 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TBRG1Q3YBR2 411 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TP53I3Q53FA7 332 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 ZNF628Q5EBL2 1059 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 UBE2NLQ5JXB2 153 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 C18orf63Q68DL7 685 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 VASNQ6EMK4 673 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 LILRA6Q6PI73 481 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TMEM207Q6UWW9 146 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 RAB11FIP2Q7L804 512 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 RCBTB1Q8NDN9 531 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 ZNF740Q8NDX6 193 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 GATA6Q92908 595 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 C20orf27Q9GZN8 174 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 OR52A5Q9H2C5 316 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TMEM185BQ9H7F4 350 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 APMAPQ9HDC9 416 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 UBQLN2Q9UHD9 624 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NPIPA5A0A0B4J1W7 369 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TMEM269A0A1B0GVZ9 245 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NPIPA7E9PJI5 369 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 FRS3O43559 492 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 OR7A10O76100 309 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 ACTL6BO94805 426 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 GASTP01350 101 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NPIPA8P0DM63 369 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 MTHFD2P13995 350 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 STT3AP46977 705 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 BMXP51813 675 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NCS1P62166 190 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TRAPPC6BQ86SZ2 158 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 HYLS1Q96M11 299 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 VN1R3Q9BXE9 311 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 LIN28AQ9H9Z2 209 aaKnown RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 ELOVL3Q9HB03 270 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 KLK4Q9Y5K2 254 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 ZNF736B4DX44 427 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 K7ESM1 405 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 HTR3BO95264 441 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 WDPCPO95876 746 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 OLFM2O95897 454 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 LGI1O95970 557 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 CD14P08571 375 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 AKAIN1P0CW23 69 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TACR1P25103 407 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TRA2AQ13595 282 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 RHEBQ15382 184 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NIPAL3Q6P499 406 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 S100A7AQ86SG5 101 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 FOXRED2Q8IWF2 684 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 PIAS4Q8N2W9 510 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 RNF175Q8N4F7 328 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 SENP5Q96HI0 755 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 COG8Q96MW5 612 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 SLC19A3Q9BZV2 496 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 C6orf106Q9H6K1 298 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 MGAT4CQ9UBM8 478 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NOSIPQ9Y314 301 aaKnown RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NRXN2Q9P2S2 1712 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TRAV18A0A075B6X5 111 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TSPAN11A1L157 253 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 LMO7DNF2Z398 122 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 H7C1Q1 480 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 IL7P13232 177 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 NID1P14543 1247 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 CAPZBP47756 277 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 ERVK-16P61578 105 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 DUSP8Q13202 625 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 RAB31Q13636 194 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 TMEM176BQ3YBM2 270 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-202ENST00000360093 CSNK2A3Q8NEV1 391 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 OR9K2Q8NGE7 335 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 OR5J2Q8NH18 312 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 C22orf15Q8WYQ4 148 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 DNAJA3Q96EY1 480 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 PRRX2Q99811 253 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 FAIMQ9NVQ4 179 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 DNAJB11Q9UBS4 358 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 EBF1Q9UH73 591 aa4.51□□□□□ -1.69
SCN3A-202ENST00000360093 UPK1BO75841 260 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 CHRM4P08173 479 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 CD22P20273 847 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 TAS2R46P59540 309 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 MCCD1P59942 119 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 GRB2P62993 217 aaKnown RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 AGBL4Q5VU57 503 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 NKAIN2Q5VXU1 208 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 CCBE1Q6UXH8 406 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 B3GNT8Q7Z7M8 397 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 ZFP41Q8N8Y5 198 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 CNEP1R1Q8N9A8 125 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 LRRC20Q8TCA0 184 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 NT5CQ8TCD5 201 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 UNKLQ9H9P5 680 aaKnown RBP4.5□□□□□ -1.69
SCN3A-202ENST00000360093 TM7SF3Q9NS93 570 aa4.5□□□□□ -1.69
SCN3A-202ENST00000360093 SIDT1Q9NXL6 827 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms