RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SF3B5Q9BWJ5 86 aaKnown RBP15.65■□□□□ 0.1
HDDC3-201ENST00000330334 SPATA9Q9BWV2 254 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 PAIP1Q9H074 479 aaKnown RBP15.65■□□□□ 0.1
HDDC3-201ENST00000330334 TAS2R16Q9NYV7 291 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 LAMP3Q9UQV4 416 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 ZNF443Q9Y2A4 671 aaPredicted RBP15.65■□□□□ 0.1
HDDC3-201ENST00000330334 SLC9A8Q9Y2E8 581 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 PCDHB14Q9Y5E9 798 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 GMEB1Q9Y692 573 aa15.65■□□□□ 0.1
HDDC3-201ENST00000330334 PDLIM1O00151 329 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 RAMP1O60894 148 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 BCHEP06276 602 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 GPIP06744 558 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 HOXB9P17482 250 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-201ENST00000330334 CXCR1P25024 350 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 ATP5J2P56134 94 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 COPZ1P61923 177 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 STK11Q15831 433 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 ETFDHQ16134 617 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 GTDC1Q4AE62 458 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 C6orf10Q5SRN2 563 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 UBE2J2Q8N2K1 259 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 CIARTQ8N365 385 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-201ENST00000330334 AURKBQ96GD4 344 aaPredicted RBP15.64■□□□□ 0.09
HDDC3-201ENST00000330334 TMEM19Q96HH6 336 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 A4GALTQ9NPC4 353 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 TCF7L2Q9NQB0 619 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 MGAT4BQ9UQ53 548 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 CHST2Q9Y4C5 530 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 FLVCR1Q9Y5Y0 555 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 ABCA2Q9BZC7 2435 aa15.64■□□□□ 0.09
HDDC3-201ENST00000330334 A0A096LPI6 279 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 ZC3H12DA2A288 527 aaKnown RBP15.63■□□□□ 0.09
HDDC3-201ENST00000330334 LIPT2A6NK58 231 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 CLIC1O00299 241 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 POLR3GO15318 223 aaPredicted RBP15.63■□□□□ 0.09
HDDC3-201ENST00000330334 SOD3P08294 240 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 GKN3PP0CG01 181 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 IDUAP35475 653 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 STX1BP61266 288 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 LRIF1Q5T3J3 769 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 BLOC1S3Q6QNY0 202 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.63■□□□□ 0.09
HDDC3-201ENST00000330334 ATG4DQ86TL0 474 aaPredicted RBP15.63■□□□□ 0.09
HDDC3-201ENST00000330334 CLIP4Q8N3C7 705 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 LRRC8CQ8TDW0 803 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 TMEM45BQ96B21 275 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 TRMT61AQ96FX7 289 aaKnown RBP15.63■□□□□ 0.09
HDDC3-201ENST00000330334 CCDC28BQ9BUN5 200 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 AMBRA1Q9C0C7 1298 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 CACYBPQ9HB71 228 aaKnown RBP15.63■□□□□ 0.09
HDDC3-201ENST00000330334 DCTN4Q9UJW0 460 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 SLC25A15Q9Y619 301 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 CSPG4Q6UVK1 2322 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 TLN2Q9Y4G6 2542 aa15.63■□□□□ 0.09
HDDC3-201ENST00000330334 CIB4A0PJX0 185 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 TRIM64A6NGJ6 449 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 TRIM64BA6NI03 449 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 CCT8L1PA6NM43 557 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 A8MVM7 634 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 SHISA9B4DS77 424 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 NPIPB7O75200 414 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 LY6G6DO95868 133 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 IGHV3-9P01782 118 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 ETS2P15036 469 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 IDH3AP50213 366 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 FAPQ12884 760 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 GABRA6Q16445 453 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 PGGHGQ32M88 737 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 TMEM108Q6UXF1 575 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 FUNDC1Q8IVP5 155 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 GOLGA6L1Q8N7Z2 621 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 C1orf162Q8NEQ5 155 aaPredicted RBP15.62■□□□□ 0.09
HDDC3-201ENST00000330334 KBTBD8Q8NFY9 601 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 DNAJA3Q96EY1 480 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 BOD1Q96IK1 185 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 ATP6V1G3Q96LB4 118 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 FAIMQ9NVQ4 179 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 CISD1Q9NZ45 108 aaKnown RBP15.62■□□□□ 0.09
HDDC3-201ENST00000330334 NPAP1Q9NZP6 1156 aa15.62■□□□□ 0.09
HDDC3-201ENST00000330334 A0A1W2PP18 115 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 AQP7P3A6NL99 342 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 RAD51DO75771 328 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 VAMP5O95183 116 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 ITGA5P08648 1049 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 PTAFRP25105 342 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 TGFBR3Q03167 851 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 CEACAM7Q14002 265 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 OTUD3Q5T2D3 398 aaPredicted RBP15.61■□□□□ 0.09
HDDC3-201ENST00000330334 SLC2A7Q6PXP3 512 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 KLHL17Q6TDP4 642 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 DTX2Q86UW9 622 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 CADM2Q8N3J6 435 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 C17orf78Q8N4C9 275 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 ZIC4Q8N9L1 334 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 BBS10Q8TAM1 723 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 STK35Q8TDR2 534 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 STON2Q8WXE9 905 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 NEUROG1Q92886 237 aa15.61■□□□□ 0.09
HDDC3-201ENST00000330334 SLCO1B3Q9NPD5 702 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms