RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ATP13A2Q9NQ11 1180 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 PRDM9Q9NQV7 894 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 GASTP01350 101 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 FCGR2AP12318 317 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 BIDP55957 195 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 LCN10Q6JVE6 187 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 TMIGD2Q96BF3 282 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 TM4SF18Q96CE8 201 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ZC3HAV1LQ96H79 300 aaKnown RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 H0Y8X5 98 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ENSAO43768 121 aaKnown RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 B3GALT4O96024 378 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 GAAP10253 952 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 GCAP28676 217 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 HOXA9P31269 272 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 KCNAB1Q14722 419 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF691Q5VV52 312 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 B3GNT8Q7Z7M8 397 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ASCC1Q8N9N2 400 aaKnown RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 STEAP2Q8NFT2 490 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ELF4Q99607 663 aaPredicted RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 MRI1Q9BV20 369 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 GCM1Q9NP62 436 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 TACR1P25103 407 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 HLA-DMAP28067 261 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 AGAP7PQ5VUJ5 663 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 AGAP6Q5VW22 663 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 TPRA1Q86W33 373 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF808Q8N4W9 903 aaPredicted RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 AGAP4Q96P64 663 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ZFP57Q9NU63 452 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 IGHV3-20A0A0C4DH32 117 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 ACP2P11117 423 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 SULF2Q8IWU5 870 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 SLC35F3Q8IY50 421 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 SLC7A13Q8TCU3 470 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 THOC3Q96J01 351 aaKnown RBP16.06■□□□□ 0.16
SHANK1-201ENST00000293441 SLC46A1Q96NT5 459 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 SNX18Q96RF0 628 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 MMP28Q9H239 520 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 USP22Q9UPT9 525 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 RASD1Q9Y272 281 aa16.06■□□□□ 0.16
SHANK1-201ENST00000293441 TAF1P21675 1872 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 D6RAR5 112 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 NCR1O76036 304 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 SLC36A2Q495M3 483 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 MARCH3Q86UD3 253 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 TFP02787 698 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 MSL3P1P0C860 447 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 OPRD1P41143 372 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 CCSMST1Q4G0I0 132 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 SLC37A2Q8TED4 501 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ZNF578Q96N58 590 aaPredicted RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 THAP7Q9BT49 309 aaPredicted RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 NME7Q9Y5B8 376 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 CYCSP99999 105 aaKnown RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 LTBQ06643 244 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 GTPBP8Q8N3Z3 284 aaPredicted RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 OR8J2Q8NGG1 315 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 BORCS7Q96B45 105 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ACKR4Q9NPB9 350 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 INPP5EQ9NRR6 644 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 TMEM100Q9NV29 134 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 PRAMEF27A3QJZ7 478 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 KLRC4-KLRK1H3BQV0 150 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 H7C2Y5 167 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ALOX12BO75342 701 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 OR8G3PP0DMU2 310 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 CRHBPP24387 322 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 BCL7AQ4VC05 210 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 PRAMEF9Q5VWM5 478 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 TNFRSF13CQ96RJ3 184 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 VRK1Q99986 396 aaPredicted RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 METTL9Q9H1A3 318 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 MRPS2Q9Y399 296 aaKnown RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 PKD1L3Q7Z443 1732 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 A0A0U1RQK1 487 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 A0A1B0GX78 115 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ANKRD34BA5PLL1 514 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 IFNA17P01571 189 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 LUMP51884 338 aaPredicted RBP16.05■□□□□ 0.16
SHANK1-201ENST00000293441 S100A12P80511 92 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 TBPL2Q6SJ96 375 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 GPR155Q7Z3F1 870 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 ANKRD33Q7Z3H0 272 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 KIF18BQ86Y91 864 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 OR1E3Q8WZA6 343 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 GLIPR2Q9H4G4 154 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 SLC22A7Q9Y694 548 aa16.05■□□□□ 0.16
SHANK1-201ENST00000293441 CEBPZOSA8MTT3 80 aa16.04■□□□□ 0.16
SHANK1-201ENST00000293441 ARPC1BO15143 372 aaKnown RBP16.04■□□□□ 0.16
SHANK1-201ENST00000293441 GABRB3P28472 473 aa16.04■□□□□ 0.16
SHANK1-201ENST00000293441 METTL11BQ5VVY1 283 aa16.04■□□□□ 0.16
SHANK1-201ENST00000293441 OR5M1Q8NGP8 315 aa16.04■□□□□ 0.16
SHANK1-201ENST00000293441 NT5C3BQ969T7 300 aa16.04■□□□□ 0.16
SHANK1-201ENST00000293441 CPPED1Q9BRF8 314 aaPredicted RBP16.04■□□□□ 0.16
SHANK1-201ENST00000293441 BABAM2Q9NXR7 383 aa16.04■□□□□ 0.16
SHANK1-201ENST00000293441 TPOP07202 933 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms