RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 HOXA6P31267 233 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 RPS4XP62701 263 aaKnown RBP11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 PLCXD2Q0VAA5 305 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 ISXQ2M1V0 245 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 AGAP7PQ5VUJ5 663 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 RABEPKQ7Z6M1 372 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 OR8H2Q8N162 312 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 POMGNT2Q8NAT1 580 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 PLPP5Q8NEB5 264 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 OR5W2Q8NH69 310 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 SDHCQ99643 169 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 ABCB9Q9NP78 766 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 NRIP3Q9NQ35 241 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 SUSD2Q9UGT4 822 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 ATXN7L1Q9ULK2 861 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 ADAM18Q9Y3Q7 739 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 NOX1Q9Y5S8 564 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 V9GYH0 126 aa11.82□□□□□ -0.52
SPTLC1-201ENST00000262554 MPDZO75970 2070 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 A0A1W2PQD3 144 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 SMIM30A4D0T7 59 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 CDC14CA4D256 554 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 J3QLW9 94 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 TSPAN2O60636 221 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 DLGAP3O95886 979 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF19P17023 458 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 F8A1P23610 371 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 ACY1Q03154 408 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF85Q03923 595 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 DBPQ10586 325 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 PON3Q15166 354 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 TRAM1Q15629 374 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF74Q16587 644 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 FAAH2Q6GMR7 532 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 RHBDD2Q6NTF9 364 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 LIPHQ8WWY8 451 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 ZMYND19Q96E35 227 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 C4orf36Q96KX1 117 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 DCLRE1CQ96SD1 692 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 GPX7Q96SL4 187 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 CNN2Q99439 309 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 C12orf10Q9HB07 376 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 NANSQ9NR45 359 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 CTSFQ9UBX1 484 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 PCDHGB7Q9Y5F8 929 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 SIRT4Q9Y6E7 314 aaPredicted RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 TNRC6BQ9UPQ9 1833 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 SEC16AO15027 2179 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 SDK1Q7Z5N4 2213 aa11.81□□□□□ -0.52
SPTLC1-201ENST00000262554 A0A1B0GTQ1 180 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 BLOC1S5-TXNDC5H3BN57 136 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 HCRTR2O43614 444 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 NDUFB5O43674 189 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 APOA1P02647 267 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ANKRD34CP0C6C1 535 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ERVK-25P63136 954 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF117Q03924 483 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 SQSTM1Q13501 440 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 GGTLC2Q14390 218 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 GXYLT1Q4G148 440 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 PMS2CLQ68D20 193 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 GUSBP11Q6P575 273 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 FAM131AQ6UXB0 335 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF574Q6ZN55 896 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 TMEM91Q6ZNR0 172 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 VASH1Q7L8A9 365 aaPredicted RBP11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 KANSL1Q7Z3B3 1105 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 HTRA1Q92743 480 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 OMA1Q96E52 524 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 DIRAS2Q96HU8 199 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 TBL1XR1Q9BZK7 514 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 NDEL1Q9GZM8 345 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 TGIF2Q9GZN2 237 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 KLHL1Q9NR64 748 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 HIF3AQ9Y2N7 669 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 SLC6A5Q9Y345 797 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 CABIN1Q9Y6J0 2220 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 BOLA2-SMG1P6H3BVE0 249 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 PLPP2O43688 288 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 EIF4E2O60573 245 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 OR2T7P0C7T2 308 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 CFL1P23528 166 aaKnown RBP11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ABCD3P28288 659 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 TACR3P29371 465 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 PNLIPRP2P54317 469 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ACTA2P62736 377 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 PPP3R1P63098 170 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ACTG2P63267 376 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 INSL4Q14641 139 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 SLC35D3Q5M8T2 416 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 DESI1Q6ICB0 168 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ARL9Q6T311 187 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 LANCL3Q6ZV70 420 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 NUP54Q7Z3B4 507 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 TMPRSS9Q7Z410 1059 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 NPEPL1Q8NDH3 523 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 C17orf47Q8NEP4 570 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 OR2T27Q8NH04 317 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms