RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 LCA5Q86VQ0 697 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 TTC5Q8N0Z6 440 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 LINC00304Q8N9R0 145 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 KCTD6Q8NC69 237 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 KIAA0895Q8NCT3 520 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 VN1R2Q8NFZ6 395 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 NEK11Q8NG66 645 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 OR4L1Q8NH43 312 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DNAJA3Q96EY1 480 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 RPGRIP1Q96KN7 1286 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 FER1L6-AS2Q96M78 137 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 SLF1Q9BQI6 1058 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 C8orf33Q9H7E9 229 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 MAGEF1Q9HAY2 307 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DDX28Q9NUL7 540 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 GDAP2Q9NXN4 497 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 TERF2IPQ9NYB0 399 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 GLS2Q9UI32 602 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 BTNL2Q9UIR0 455 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DIMT1Q9UNQ2 313 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 ANKHD1Q8IWZ3 2542 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 USP9YO00507 2555 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 EVC2Q86UK5 1308 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 RAD50Q92878 1312 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 SPTBN1Q01082 2364 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 ZNF236Q9UL36 1845 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 BRWD1Q9NSI6 2320 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 MED23Q9ULK4 1368 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 A0A1B0GW55 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 URADA6NGE7 173 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 IDSB3KWA1 339 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 GLCEO94923 617 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 HIST1H2AGP0C0S8 130 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4L2P0CJ85 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4L3P0CJ86 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4L5P0CJ88 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4L6P0CJ89 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4L7P0CJ90 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 TDGF1P13385 188 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 CD82P27701 267 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 RPL29P47914 159 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 ACLYP53396 1101 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 ATXN3P54252 364 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 SH3BGRP55822 239 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 KRTAP12-1P59990 96 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 IRX3P78415 501 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 FUT7Q11130 342 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 VGLL4Q14135 290 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 EPC2Q52LR7 807 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 KRBOX4Q5JUW0 171 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 C1orf141Q5JVX7 400 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 ZNF57Q68EA5 555 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4L9Q6RFH8 374 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 VPS36Q86VN1 386 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 DCUN1D4Q92564 292 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 HIST1H2ACQ93077 130 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 MLPHQ9BV36 600 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 SPNS1Q9H2V7 528 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 TMEM245Q9H330 911 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 FAM124BQ9H5Z6 455 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 DUX4Q9UBX2 424 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 EIF3LQ9Y262 564 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 ASF1AQ9Y294 204 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 YTHDF2Q9Y5A9 579 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 UBR2Q8IWV8 1755 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 URB1O60287 2271 aaKnown RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 DOPEY2Q9Y3R5 2298 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 UBR5O95071 2799 aaPredicted RBP0.41□□□□□ -2.34
CEP290-208ENST00000604024 MYO9BQ13459 2157 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 UBE4BO95155 1302 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 KIF16BQ96L93 1317 aa0.41□□□□□ -2.34
CEP290-208ENST00000604024 ASXL3Q9C0F0 2248 aa0.4□□□□□ -2.34
CEP290-208ENST00000604024 ANKRD31Q8N7Z5 1873 aa0.4□□□□□ -2.34
CEP290-208ENST00000604024 PLXNA1Q9UIW2 1896 aa0.4□□□□□ -2.34
CEP290-208ENST00000604024 NBEAL1Q6ZS30 2694 aa0.4□□□□□ -2.34
CEP290-208ENST00000604024 GREB1Q4ZG55 1949 aa0.4□□□□□ -2.34
CEP290-208ENST00000604024 A0A1B0GUH1 482 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 C3orf84H3BNL1 204 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CTDSPLO15194 276 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 HCN1O60741 890 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CLDN9O95484 217 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 PCCBP05166 539 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 COX6B1P14854 86 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 COL8A2P25067 703 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 GDI1P31150 447 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 DUSP3P51452 185 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 GFPT1Q06210 699 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 SCN1BQ07699 218 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 KLRB1Q12918 225 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 SCGB2A2Q13296 93 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 SNTB2Q13425 540 aaKnown RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 IHHQ14623 411 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 CDKN3Q16667 212 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 ACSF3Q4G176 576 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 LIPNQ5VXI9 398 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 OR52W1Q6IF63 320 aa0.4□□□□□ -2.35
CEP290-208ENST00000604024 TMED8Q6PL24 325 aaPredicted RBP0.4□□□□□ -2.35
CEP290-208ENST00000604024 UNQ9370/PRO34162Q6UXP9 181 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms