RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FOXF1Q12946 379 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 TOP3AQ13472 1001 aaPredicted RBP18.85■□□□□ 0.61
PNKP-203ENST00000593946 APOFQ13790 326 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 ZNF74Q16587 644 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 ZBED5Q49AG3 693 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 SMARCD3Q6STE5 483 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 OR4Q3Q8NH05 313 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 TRUB1Q8WWH5 349 aaKnown RBP18.85■□□□□ 0.61
PNKP-203ENST00000593946 KTI12Q96EK9 354 aaPredicted RBP18.85■□□□□ 0.61
PNKP-203ENST00000593946 TMEM41AQ96HV5 264 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 MRGPRX4Q96LA9 322 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 PTGES2Q9H7Z7 377 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 SACM1LQ9NTJ5 587 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 ABI3Q9P2A4 366 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 IL20RAQ9UHF4 553 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 WASF3Q9UPY6 502 aa18.85■□□□□ 0.61
PNKP-203ENST00000593946 SPTBN4Q9H254 2564 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 NCKAP5O14513 1909 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 TMEM72A0PK05 275 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 CD96P40200 585 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 SNRPGP62308 76 aaKnown RBP18.84■□□□□ 0.61
PNKP-203ENST00000593946 OC90Q02509 493 aaPredicted RBP18.84■□□□□ 0.61
PNKP-203ENST00000593946 SMN1Q16637 294 aaKnown RBP18.84■□□□□ 0.61
PNKP-203ENST00000593946 THSD4Q6ZMP0 1018 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 PTCHD4Q6ZW05 846 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 LRRC17Q8N6Y2 441 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 TSPAN14Q8NG11 270 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 OR2T33Q8NG76 320 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 OR52L1Q8NGH7 329 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 OR51A7Q8NH64 312 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 POLDIP3Q9BY77 421 aaKnown RBP18.84■□□□□ 0.61
PNKP-203ENST00000593946 ENKD1Q9H0I2 346 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 UBQLN3Q9H347 655 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 MCCC2Q9HCC0 563 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 BLOC1S6Q9UL45 172 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 ZNF337Q9Y3M9 751 aa18.84■□□□□ 0.61
PNKP-203ENST00000593946 ZC3H12DA2A288 527 aaKnown RBP18.83■□□□□ 0.61
PNKP-203ENST00000593946 A8MVM7 634 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 G3V3Y1 287 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 TRIM3O75382 744 aaPredicted RBP18.83■□□□□ 0.61
PNKP-203ENST00000593946 SLC25A12O75746 678 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 BMP7P18075 431 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 CASRP41180 1078 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 MASP1P48740 699 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 RPS4XP62701 263 aaKnown RBP18.83■□□□□ 0.61
PNKP-203ENST00000593946 EFNB1P98172 346 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 TUBA3CQ13748 450 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 PGGHGQ32M88 737 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 TUBA3EQ6PEY2 450 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 SLC43A2Q8N370 569 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 BPIFB6Q8NFQ5 453 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 OR8J1Q8NGP2 316 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 STK35Q8TDR2 534 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 TAAR8Q969N4 342 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 MOGAT1Q96PD6 335 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 TNFRSF13CQ96RJ3 184 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 SCNM1Q9BWG6 230 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 TVP23BQ9NYZ1 205 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 LRFN1Q9P244 771 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 CHRNA9Q9UGM1 479 aa18.83■□□□□ 0.61
PNKP-203ENST00000593946 ZFHX4Q86UP3 3567 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 TRAV36DV7A0A075B6V5 113 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 ZNF891A8MT65 544 aaPredicted RBP18.83■□□□□ 0.6
PNKP-203ENST00000593946 BHLHE40O14503 412 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 CDK2AP1O14519 115 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 XPNPEP2O43895 674 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 SPINK2P20155 84 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 PCYT1AP49585 367 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 CDH15P55291 814 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 LTBQ06643 244 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 TIGD3Q6B0B8 471 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 C5orf46Q6UWT4 87 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 OR1J4Q8NGS1 313 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 POC1BQ8TC44 478 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 IL4I1Q96RQ9 567 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 UTP23Q9BRU9 249 aaKnown RBP18.83■□□□□ 0.6
PNKP-203ENST00000593946 MRPS26Q9BYN8 205 aaKnown RBP18.83■□□□□ 0.6
PNKP-203ENST00000593946 NANSQ9NR45 359 aa18.83■□□□□ 0.6
PNKP-203ENST00000593946 A0A0G2JMM0 328 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 A0A1W2PPB8 328 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 A0A1W2PRS3 328 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 KIR3DP1A8MWS1 328 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 PRKYO43930 277 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 NEURL1O76050 574 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 ASAH2BP0C7U1 165 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 RPS5P46782 204 aaKnown RBP18.82■□□□□ 0.6
PNKP-203ENST00000593946 GABARAPL2P60520 117 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 CDC20Q12834 499 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 TMEM201Q5SNT2 666 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 C1QL3Q5VWW1 255 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 TCEANCQ8N8B7 351 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 FGF11Q92914 225 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 GNRHR2Q96P88 292 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 PTDSS2Q9BVG9 487 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 PRRG3Q9BZD7 231 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 FKRPQ9H9S5 495 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 TIMMDC1Q9NPL8 285 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 POLHQ9Y253 713 aa18.82■□□□□ 0.6
PNKP-203ENST00000593946 A0A087WZY1 265 aa18.81■□□□□ 0.6
PNKP-203ENST00000593946 TRIM64CA6NLI5 447 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms